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  5. AT4G18680

AT4G18680


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G18690.1); Has 361 Blast hits to 361 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 353; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18680

Target Alias Description ECC score Gene Family Method Actions
AT3G14880 No alias BEST Arabidopsis thaliana protein match is:... 0.05 OrthoFinder output from all 47 species
AT4G18650 No alias transcription factor-related 0.06 OrthoFinder output from all 47 species
AT4G18690 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT5G45830 GSQ5, DOG1, ATDOG1 delay of germination 1 0.02 OrthoFinder output from all 47 species
Aspi01Gene65334.t1 Aspi01Gene65334 DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31901 No alias DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09588 GSQ5, DOG1, ATDOG1 DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24749 No alias DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021229001 No alias Protein DOG1-like 4 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01022365001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.17 OrthoFinder output from all 47 species
Gb_17808 No alias transcription factor (DOG) 0.03 OrthoFinder output from all 47 species
LOC_Os05g48650.1 LOC_Os05g48650 transcription factor (DOG) 0.11 OrthoFinder output from all 47 species
Lfl_g00482 No alias DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17495 No alias DOG-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_278704g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g28510.1 No alias transcription factor (DOG) 0.02 OrthoFinder output from all 47 species
Pnu_g22337 GSQ5, DOG1, ATDOG1 DOG-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g27300 No alias DOG-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g25372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28827 No alias DOG-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo181239 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Solyc02g072570.2.1 GSQ5, DOG1,... transcription factor (DOG) 0.13 OrthoFinder output from all 47 species
Solyc02g073580.1.1 Solyc02g073580 transcription factor (DOG) 0.01 OrthoFinder output from all 47 species
Solyc03g006120.4.1 Solyc03g006120 transcription factor (DOG) 0.24 OrthoFinder output from all 47 species
Solyc05g056410.1.1 Solyc05g056410 transcription factor (DOG) 0.03 OrthoFinder output from all 47 species
Solyc07g062380.1.1 Solyc07g062380 transcription factor (DOG) 0.06 OrthoFinder output from all 47 species
Solyc09g005610.4.1 RAS1, Solyc09g005610 transcription factor (DOG) 0.03 OrthoFinder output from all 47 species
Solyc12g014300.3.1 Solyc12g014300 transcription factor (DOG) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004033 aldo-keto reductase (NADP) activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004462 lactoylglutathione lyase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008106 alcohol dehydrogenase (NADP+) activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0019430 removal of superoxide radicals IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0050898 nitrile metabolic process IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0080028 nitrile biosynthetic process IEP HCCA
BP GO:0098869 cellular oxidant detoxification IEP HCCA
BP GO:1990748 cellular detoxification IEP HCCA
InterPro domains Description Start Stop
IPR025422 TGA_domain 7 83
No external refs found!