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  5. AT4G19191

AT4G19191


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G19191
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266930 OTP81 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AT5G52630 MEF1 mitochondrial RNAediting factor 1 0.01 OrthoFinder output from all 47 species
Adi_g003135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g010854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036795 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g047975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060808 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085510 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21991 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g32888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40807 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g12476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14758 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18780 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03252 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19283 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62803 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04407 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g06042 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64343.t1 Aspi01Gene64343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000844 No alias not classified & original description: CDS=1-1557 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008393 CRR22 not classified & original description: CDS=1-1839 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026466 No alias not classified & original description: CDS=1-2883 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g030992 No alias not classified & original description: CDS=1-2877 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043395 No alias not classified & original description: CDS=1-2703 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043642 No alias not classified & original description: CDS=144-2255 0.02 OrthoFinder output from all 47 species
Azfi_s0197.g057356 No alias not classified & original description: CDS=1-2922 0.05 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.01 OrthoFinder output from all 47 species
Azfi_s0349.g066523 EMB2758 not classified & original description: CDS=141-2294 0.01 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05154 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05792 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17193 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27798 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15344 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03759 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08759 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40967 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g21312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35743 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17712 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012159001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 47 species
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
LOC_Os04g35610.1 LOC_Os04g35610 RNA editing factor (SLO2) 0.02 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Len_g02911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36226 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g36740 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07796 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15172 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57980 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06848 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006567 No alias not classified & original description: CDS=1-2706 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020039 No alias not classified & original description: CDS=1-2721 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sam_g12390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g14510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22574 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g06449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10679 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21797 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004140 dephospho-CoA kinase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009554 megasporogenesis IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000123 positive regulation of stomatal complex development IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 222 250
IPR002885 Pentatricopeptide_repeat 497 522
IPR002885 Pentatricopeptide_repeat 396 417
IPR002885 Pentatricopeptide_repeat 192 212
IPR002885 Pentatricopeptide_repeat 323 368
IPR002885 Pentatricopeptide_repeat 422 470
IPR002885 Pentatricopeptide_repeat 117 162
No external refs found!