AT4G21030 (ATDOF4;2, ATDOF4.2)

Aliases : ATDOF4;2, ATDOF4.2

Description : Dof-type zinc finger domain-containing protein

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G21030

Target	Alias	Description	ECC score	Gene Family Method
AT1G51700	ADOF1, DOF1	DOF zinc finger protein 1	0.06	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.01	OrthoFinder output from all 47 species
Adi_g074897	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g074898	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078316	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g079282	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g106349	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g39679	CDF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g27376	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g14647	ADOF2, DOF2	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene30375.t1	OBP4, Aspi01Gene30375	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0197.g057380	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=242-1003	0.02	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.01	OrthoFinder output from all 47 species
Ceric.11G069300.1	TMO6, Ceric.11G069300	transcription factor *(DOF) & original description:...	0.01	OrthoFinder output from all 47 species
Dac_g16470	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g01245	CDF1	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g10677	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12302	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01034189001	OBP3	RNA biosynthesis.transcriptional activation.C2C2...	0.01	OrthoFinder output from all 47 species
Lfl_g16402	No alias	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g28828	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g41543	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10735	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g44422	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g03112	TMO6	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Smo415191	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.06	OrthoFinder output from all 47 species
Solyc02g076850.2.1	Solyc02g076850	transcription factor (DOF)	0.08	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Spa_g39949	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20763	CDF3	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010191	mucilage metabolic process	None	Extended
BP	GO:0010214	seed coat development	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IDA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IMP	Interproscan
BP	GO:0048366	leaf development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048825	cotyledon development	IMP	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060688	regulation of morphogenesis of a branching structure	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905428	regulation of plant organ formation	None	Extended
BP	GO:2000032	regulation of secondary shoot formation	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	21	73

External Links

No external refs found!

AT4G21030 (ATDOF4;2, ATDOF4.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation