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  5. AT4G22030

AT4G22030


Description : F-box family protein with a domain of unknown function (DUF295)


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G22030

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00037390 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00044p00128270 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00085p00174790 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g03889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33945.t1 Aspi01Gene33945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34497.t1 Aspi01Gene34497 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34559.t1 Aspi01Gene34559 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0334.g065497 No alias not classified & original description: CDS=1-1488 0.02 OrthoFinder output from all 47 species
Ceric.1Z179600.1 Ceric.1Z179600 not classified & original description: pacid=50596894... 0.02 OrthoFinder output from all 47 species
Ehy_g17786 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29424 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Gb_35317 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g13220.1 LOC_Os02g13220 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g28590.1 LOC_Os02g28590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g17910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g12175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Tin_g07848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014444_P001 Zm00001e014444 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 409 445
IPR027949 Chloroplast_duf 87 394
IPR005174 DUF295 541 595
No external refs found!