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  5. AT4G23370

AT4G23370


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23360.1); Has 2365 Blast hits to 710 proteins in 27 species: Archae - 0; Bacteria - 35; Metazoa - 0; Fungi - 30; Plants - 2300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G23370
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT3G48230 No alias Protein of Unknown Function (DUF239) 0.05 OrthoFinder output from all 47 species
AT4G23350 No alias Protein of Unknown Function (DUF239) 0.03 OrthoFinder output from all 47 species
AT4G23355 No alias No description available 0.03 OrthoFinder output from all 47 species
AT4G23360 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT4G23365 No alias No description available 0.08 OrthoFinder output from all 47 species
AT5G25950 No alias Protein of Unknown Function (DUF239) 0.09 OrthoFinder output from all 47 species
Ala_g09383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007693001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os08g45170.1 LOC_Os08g45170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_109497g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g071590.3.1 Solyc06g071590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
InterPro domains Description Start Stop
IPR004314 Neprosin 809 1033
IPR004314 Neprosin 152 226
IPR004314 Neprosin 463 644
IPR004314 Neprosin 231 301
IPR025521 Neprosin_propep 50 139
IPR025521 Neprosin_propep 340 451
IPR025521 Neprosin_propep 687 774
No external refs found!