1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G24260

AT4G24260 (ATGH9A3, GH9A3, KOR3)


Aliases : ATGH9A3, GH9A3, KOR3

Description : glycosyl hydrolase 9A3


Gene families : OG0001763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001763_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G24260

Target Alias Description ECC score Gene Family Method Actions
Smo75214 ATGH9A1, IRX2,... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Solyc05g005080.3.1 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species
Zm00001e042024_P001 ATGH9A1, IRX2,... KOR-type cellulose synthase endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009624 response to nematode IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000419 RNA polymerase V complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 109 583
No external refs found!