Aliases : ATRGTA1, RGTA1
Description : RAB geranylgeranyl transferase alpha subunit 1
Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00228890 | ATRGTA1, RGTA1,... | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05655 | ATRGTA1, RGTA1 | EC_2.5 transferase transferring alkyl or aryl group,... | 0.03 | OrthoFinder output from all 47 species | |
| Cre07.g339350 | No alias | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01605 | ATRGTA1, RGTA1 | EC_2.5 transferase transferring alkyl or aryl group,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009190001 | ATRGTA1, RGTA1 | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009191001 | ATRGTA1, RGTA1 | Vesicle trafficking.regulation of membrane tethering and... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g46380.1 | RGTA2, ATRGTA2,... | subunit alpha of RAB-GTPase geranylgeranyltransferase... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11677 | ATRGTA1, RGTA1 | EC_2.5 transferase transferring alkyl or aryl group,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g076430.3.1 | ATRGTA1, RGTA1,... | subunit alpha of RAB-GTPase geranylgeranyltransferase... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| CC | GO:0005829 | cytosol | IDA | Interproscan |
| BP | GO:0046686 | response to cadmium ion | IEP | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000502 | proteasome complex | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004826 | phenylalanine-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
| CC | GO:0005768 | endosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006432 | phenylalanyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006482 | protein demethylation | IEP | HCCA |
| BP | GO:0006626 | protein targeting to mitochondrion | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| BP | GO:0008214 | protein dealkylation | IEP | HCCA |
| BP | GO:0008219 | cell death | IEP | HCCA |
| CC | GO:0008540 | proteasome regulatory particle, base subcomplex | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009328 | phenylalanine-tRNA ligase complex | IEP | HCCA |
| BP | GO:0009626 | plant-type hypersensitive response | IEP | HCCA |
| BP | GO:0009910 | negative regulation of flower development | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010216 | maintenance of DNA methylation | IEP | HCCA |
| BP | GO:0012501 | programmed cell death | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| BP | GO:0016577 | histone demethylation | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
| CC | GO:0031410 | cytoplasmic vesicle | IEP | HCCA |
| BP | GO:0031935 | obsolete regulation of chromatin silencing | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031982 | vesicle | IEP | HCCA |
| MF | GO:0032451 | demethylase activity | IEP | HCCA |
| MF | GO:0032452 | histone demethylase activity | IEP | HCCA |
| MF | GO:0032453 | histone H3K4 demethylase activity | IEP | HCCA |
| BP | GO:0034050 | programmed cell death induced by symbiont | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0034720 | histone H3-K4 demethylation | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043687 | post-translational protein modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0047262 | polygalacturonate 4-alpha-galacturonosyltransferase activity | IEP | HCCA |
| BP | GO:0048581 | negative regulation of post-embryonic development | IEP | HCCA |
| BP | GO:0051093 | negative regulation of developmental process | IEP | HCCA |
| BP | GO:0051241 | negative regulation of multicellular organismal process | IEP | HCCA |
| BP | GO:0051702 | biological process involved in interaction with symbiont | IEP | HCCA |
| BP | GO:0070076 | histone lysine demethylation | IEP | HCCA |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | HCCA |
| BP | GO:0070988 | demethylation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0097708 | intracellular vesicle | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140457 | protein demethylase activity | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
| BP | GO:2000242 | negative regulation of reproductive process | IEP | HCCA |
| No external refs found! |
