AT4G24770 (ATRBP31, CP31, ATRBP33, RBP31)

Aliases : ATRBP31, CP31, ATRBP33, RBP31

Description : 31-kDa RNA binding protein

Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G24770

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00197820	evm_27.TU.AmTr_v1...	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
AMTR_s00008p00202090	evm_27.TU.AmTr_v1...	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
AMTR_s00061p00032260	PDE322, CP33,...	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana	0.09	OrthoFinder output from all 47 species
AMTR_s00061p00142700	ATRBP31, CP31,...	RNA processing.organelle machineries.RNA...	0.08	OrthoFinder output from all 47 species
AMTR_s00148p00072380	evm_27.TU.AmTr_v1...	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris	0.04	OrthoFinder output from all 47 species
AMTR_s00166p00060690	ATRBP31, CP31,...	RNA processing.organelle machineries.RNA...	0.04	OrthoFinder output from all 47 species
Adi_g019288	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g019289	ATRBP31, CP31,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g022371	ATRBP31, CP31,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g053286	CP31B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g10264	ATRBP31, CP31,...	plastidial ribonucleoprotein *(CP33a) & original...	0.05	OrthoFinder output from all 47 species
Ala_g12603	ATRBP31, CP31,...	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Ala_g39448	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g10701	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g07067	ATRBP31, CP31,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g07142	ATRBP31, CP31,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14081	ATRBP31, CP31,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene25641.t1	ATRBP31, CP31,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g010976	No alias	not classified & original description: CDS=261-1286	0.03	OrthoFinder output from all 47 species
Azfi_s0017.g014465	ATRBP31, CP31,...	not classified & original description: CDS=173-1078	0.04	OrthoFinder output from all 47 species
Azfi_s0037.g026033	No alias	not classified & original description: CDS=1-825	0.06	OrthoFinder output from all 47 species
Azfi_s0159.g053948	ATRBP31, CP31,...	not classified & original description: CDS=143-1057	0.13	OrthoFinder output from all 47 species
Ceric.11G096500.1	ATRBP31, CP31,...	not classified & original description: pacid=50595915...	0.09	OrthoFinder output from all 47 species
Ceric.38G067800.1	ATRBP31, CP31,...	not classified & original description: pacid=50580282...	0.1	OrthoFinder output from all 47 species
Dac_g21785	ATRBP31, CP31,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g01274	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g00421	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g05227	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g00942	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05650	ATRBP31, CP31,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10561	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01007596001	CP31B	RNA processing.organelle machineries.RNA...	0.15	OrthoFinder output from all 47 species
GSVIVT01013146001	No alias	RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana	0.11	OrthoFinder output from all 47 species
GSVIVT01025697001	No alias	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris	0.17	OrthoFinder output from all 47 species
GSVIVT01027917001	No alias	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris	0.18	OrthoFinder output from all 47 species
GSVIVT01032039001	No alias	Protein biosynthesis.organelle translation...	0.23	OrthoFinder output from all 47 species
GSVIVT01032361001	CP31B	RNA processing.organelle machineries.RNA...	0.22	OrthoFinder output from all 47 species
Gb_00173	CP31B	RNA editing factor (CP31)	0.01	OrthoFinder output from all 47 species
Gb_05747	PDE322, CP33	component psPSRP2 of small ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Gb_28108	CP31B	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.09	OrthoFinder output from all 47 species
Gb_29798	No alias	RNA-binding protein CP29B, chloroplastic OS=Arabidopsis...	0.08	OrthoFinder output from all 47 species
Gb_32176	No alias	component psPSRP2 of small ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
LOC_Os02g57010.1	LOC_Os02g57010	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.1	OrthoFinder output from all 47 species
LOC_Os03g25960.1	LOC_Os03g25960	RNA-binding protein CP29B, chloroplastic OS=Arabidopsis...	0.2	OrthoFinder output from all 47 species
LOC_Os04g50110.1	LOC_Os04g50110	no hits & (original description: none)	0.15	OrthoFinder output from all 47 species
LOC_Os07g06450.1	PDE322, CP33,...	RNA-binding protein CP33, chloroplastic OS=Arabidopsis...	0.13	OrthoFinder output from all 47 species
LOC_Os08g44290.1	ATRBP31, CP31,...	RNA editing factor (CP31)	0.07	OrthoFinder output from all 47 species
LOC_Os09g10760.1	LOC_Os09g10760	component psPSRP2 of small ribosomal subunit proteome	0.22	OrthoFinder output from all 47 species
LOC_Os09g39180.1	ATRBP31, CP31,...	RNA editing factor (CP31)	0.17	OrthoFinder output from all 47 species
Len_g16035	CP31B	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_136464g0010	ATRBP31, CP31,...	28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.05	OrthoFinder output from all 47 species
MA_320479g0010	No alias	RNA-binding protein CP29B, chloroplastic OS=Arabidopsis...	0.09	OrthoFinder output from all 47 species
MA_474396g0010	ATRBP31, CP31,...	RNA editing factor (CP31)	0.05	OrthoFinder output from all 47 species
MA_482994g0010	CP31B	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.07	OrthoFinder output from all 47 species
MA_65183g0010	No alias	component psPSRP2 of small ribosomal subunit proteome	0.15	OrthoFinder output from all 47 species
Mp2g13800.1	No alias	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.31	OrthoFinder output from all 47 species
Mp3g24820.1	CP31B	RNA-binding protein CP31B, chloroplastic OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp8g03420.1	No alias	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Msp_g04850	ATRBP31, CP31,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02906	ATRBP31, CP31,...	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Ore_g06962	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g11334	CP31B	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19962	CP31B	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g19963	ATRBP31, CP31,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g27196	ATRBP31, CP31,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pnu_g06203	No alias	plastidial ribonucleoprotein *(CP33a) & original...	0.06	OrthoFinder output from all 47 species
Pnu_g33947	No alias	plastidial ribonucleoprotein *(CP33a) & original...	0.06	OrthoFinder output from all 47 species
Pp3c12_9890V3.1	Pp3c12_9890	chloroplast RNA-binding protein 29	0.03	OrthoFinder output from all 47 species
Pp3c24_17170V3.1	Pp3c24_17170	chloroplast RNA-binding protein 29	0.01	OrthoFinder output from all 47 species
Ppi_g02835	ATRBP31, CP31,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g18180	ATRBP31, CP31,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015482	ATRBP31, CP31,...	not classified & original description: CDS=157-1524	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021464	CP31B	not classified & original description: CDS=19-840	0.14	OrthoFinder output from all 47 species
Sam_g06842	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Solyc01g006940.4.1	PDE322, CP33,...	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.22	OrthoFinder output from all 47 species
Solyc03g111840.3.1	ATRBP31, CP31,...	RNA editing factor (CP31)	0.3	OrthoFinder output from all 47 species
Solyc04g074750.3.1	Solyc04g074750	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana...	0.1	OrthoFinder output from all 47 species
Solyc08g076840.3.1	Solyc08g076840	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Solyc09g007850.3.1	Solyc09g007850	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana...	0.08	OrthoFinder output from all 47 species
Solyc09g090960.4.1	Solyc09g090960	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana...	0.12	OrthoFinder output from all 47 species
Solyc10g086150.2.1	Solyc10g086150	29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana...	0.13	OrthoFinder output from all 47 species
Spa_g07687	ATRBP31, CP31,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g08465	ATRBP31, CP31,...	not classified & original description: none	0.14	OrthoFinder output from all 47 species
Tin_g05046	ATRBP31, CP31,...	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Zm00001e001824_P002	Zm00001e001824	RNA-binding protein CP29B, chloroplastic OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Zm00001e003947_P001	ATRBP31, CP31,...	RNA editing factor (CP31)	0.07	OrthoFinder output from all 47 species
Zm00001e007101_P002	Zm00001e007101	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.1	OrthoFinder output from all 47 species
Zm00001e010844_P001	Zm00001e010844	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana...	0.03	OrthoFinder output from all 47 species
Zm00001e016211_P001	Zm00001e016211	33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Zm00001e022086_P002	ATRBP31, CP31,...	RNA editing factor (CP31)	0.22	OrthoFinder output from all 47 species
Zm00001e032835_P001	PDE322, CP33,...	RNA-binding protein CP33, chloroplastic OS=Arabidopsis...	0.19	OrthoFinder output from all 47 species
Zm00001e033465_P001	ATRBP31, CP31,...	RNA editing factor (CP31)	0.21	OrthoFinder output from all 47 species
Zm00001e033636_P003	Zm00001e033636	component psPSRP2 of small ribosomal subunit proteome	0.24	OrthoFinder output from all 47 species
Zm00001e035630_P001	Zm00001e035630	29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IDA	Interproscan
MF	GO:0003723	RNA binding	ISS	Interproscan
MF	GO:0003723	RNA binding	TAS	Interproscan
MF	GO:0003727	single-stranded RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006396	RNA processing	TAS	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008187	poly-pyrimidine tract binding	None	Extended
MF	GO:0008266	poly(U) RNA binding	IDA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	RCA	Interproscan
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	None	Extended
BP	GO:0009451	RNA modification	IMP	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009631	cold acclimation	IMP	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009895	negative regulation of catabolic process	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	RCA	Interproscan
BP	GO:0016553	base conversion or substitution editing	IMP	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030154	cell differentiation	RCA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031330	negative regulation of cellular catabolic process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043487	regulation of RNA stability	None	Extended
BP	GO:0043489	RNA stabilization	IMP	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045036	protein targeting to chloroplast	RCA	Interproscan
BP	GO:0045087	innate immune response	IDA	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051707	response to other organism	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072596	establishment of protein localization to chloroplast	None	Extended
BP	GO:0072598	protein localization to chloroplast	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902369	negative regulation of RNA catabolic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
BP	GO:0000272	polysaccharide catabolic process	IEP	HCCA
CC	GO:0000311	plastid large ribosomal subunit	IEP	HCCA
CC	GO:0000312	plastid small ribosomal subunit	IEP	HCCA
CC	GO:0000313	organellar ribosome	IEP	HCCA
CC	GO:0000314	organellar small ribosomal subunit	IEP	HCCA
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004791	thioredoxin-disulfide reductase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006655	phosphatidylglycerol biosynthetic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006733	obsolete oxidoreduction coenzyme metabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009071	serine family amino acid catabolic process	IEP	HCCA
BP	GO:0009106	lipoate metabolic process	IEP	HCCA
BP	GO:0009108	obsolete coenzyme biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	HCCA
CC	GO:0009295	nucleoid	IEP	HCCA
CC	GO:0009508	plastid chromosome	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009547	plastid ribosome	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
BP	GO:0009658	chloroplast organization	IEP	HCCA
BP	GO:0009668	plastid membrane organization	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009902	chloroplast relocation	IEP	HCCA
CC	GO:0010007	magnesium chelatase complex	IEP	HCCA
BP	GO:0010027	thylakoid membrane organization	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010109	regulation of photosynthesis	IEP	HCCA
BP	GO:0010114	response to red light	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0010581	regulation of starch biosynthetic process	IEP	HCCA
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0010962	regulation of glucan biosynthetic process	IEP	HCCA
MF	GO:0015035	protein-disulfide reductase activity	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016093	polyprenol metabolic process	IEP	HCCA
BP	GO:0016094	polyprenol biosynthetic process	IEP	HCCA
BP	GO:0016108	tetraterpenoid metabolic process	IEP	HCCA
BP	GO:0016109	tetraterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
BP	GO:0016116	carotenoid metabolic process	IEP	HCCA
BP	GO:0016117	carotenoid biosynthetic process	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	HCCA
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016851	magnesium chelatase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016869	intramolecular transferase activity, transferring amino groups	IEP	HCCA
MF	GO:0016987	sigma factor activity	IEP	HCCA
BP	GO:0017014	protein nitrosylation	IEP	HCCA
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0018198	peptidyl-cysteine modification	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019348	dolichol metabolic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019408	dolichol biosynthetic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0019750	chloroplast localization	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019758	glycosinolate biosynthetic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019761	glucosinolate biosynthetic process	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
BP	GO:0032544	plastid translation	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	HCCA
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0042286	glutamate-1-semialdehyde 2,1-aminomutase activity	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	HCCA
BP	GO:0042549	photosystem II stabilization	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0042793	plastid transcription	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046471	phosphatidylglycerol metabolic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0047134	protein-disulfide reductase (NAD(P)) activity	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	HCCA
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051640	organelle localization	IEP	HCCA
BP	GO:0051644	plastid localization	IEP	HCCA
BP	GO:0051656	establishment of organelle localization	IEP	HCCA
BP	GO:0051667	establishment of plastid localization	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	HCCA
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000904	regulation of starch metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	246	316
IPR000504	RRM_dom	152	221

External Links

No external refs found!

AT4G24770 (ATRBP31, CP31, ATRBP33, RBP31)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation