AT4G26840 (SUMO1, SUMO 1, ATSUMO1, SUM1)

Aliases : SUMO1, SUMO 1, ATSUMO1, SUM1

Description : small ubiquitin-like modifier 1

Gene families : OG0001456 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001456_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G26840

Target	Alias	Description	ECC score	Gene Family Method
Adi_g058323	SUMO1, SUMO 1,...	SUMO ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001278.7	No alias	Protein degradation.peptide...	0.01	OrthoFinder output from all 47 species
Cre16.g675637	No alias	Protein degradation.peptide...	0.02	OrthoFinder output from all 47 species
Solyc09g059970.3.1	SUMO1, SUMO 1,...	ubiquitin-fold protein (SUMO)	0.05	OrthoFinder output from all 47 species
Tin_g00215	SUMO1, SUMO 1,...	SUMO ubiquiTin-fold protein & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006094	gluconeogenesis	RCA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010286	heat acclimation	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	RCA	Interproscan
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016925	protein sumoylation	IDA	Interproscan
BP	GO:0016925	protein sumoylation	IEP	Interproscan
BP	GO:0016925	protein sumoylation	RCA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0031386	protein tag	IDA	Interproscan
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	IMP	Interproscan
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051090	regulation of DNA-binding transcription factor activity	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000418	RNA polymerase IV complex	IEP	HCCA
CC	GO:0000419	RNA polymerase V complex	IEP	HCCA
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	HCCA
BP	GO:0006304	DNA modification	IEP	HCCA
BP	GO:0006305	DNA alkylation	IEP	HCCA
BP	GO:0006306	DNA methylation	IEP	HCCA
BP	GO:0006470	protein dephosphorylation	IEP	HCCA
BP	GO:0010426	DNA methylation on cytosine within a CHH sequence	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
BP	GO:0022403	cell cycle phase	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
CC	GO:0030880	RNA polymerase complex	IEP	HCCA
BP	GO:0032776	DNA methylation on cytosine	IEP	HCCA
BP	GO:0044728	DNA methylation or demethylation	IEP	HCCA
BP	GO:0044848	biological phase	IEP	HCCA
BP	GO:0051325	interphase	IEP	HCCA
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0070918	regulatory ncRNA processing	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022617	Rad60/SUMO-like_dom	18	88

External Links

No external refs found!

AT4G26840 (SUMO1, SUMO 1, ATSUMO1, SUM1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation