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  5. AT4G27060

AT4G27060 (TOR1, CN, SPR2)


Aliases : TOR1, CN, SPR2

Description : ARM repeat superfamily protein


Gene families : OG0000975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27060
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00101520 TOR1, CN, SPR2,... Cytoskeleton.microtubular network.microtubule... 0.03 OrthoFinder output from all 47 species
AT1G27210 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g17645 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Aev_g19315 TOR1, CN, SPR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20076 TOR1, CN, SPR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20996 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Ala_g04964 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ala_g14511 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Als_g14078 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Aob_g39727 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Cba_g17419 TOR1, CN, SPR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G021300.1 TOR1, CN, SPR2,... not classified & original description: pacid=50627279... 0.02 OrthoFinder output from all 47 species
Ceric.28G043900.1 TOR1, CN, SPR2,... not classified & original description: pacid=50569898... 0.06 OrthoFinder output from all 47 species
Dcu_g01963 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ehy_g01590 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ehy_g05063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07055 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007847001 No alias TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032268001 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037609001 No alias Cytoskeleton.microtubular network.microtubule... 0.05 OrthoFinder output from all 47 species
Gb_05823 No alias TORTIFOLIA1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_31366 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.04 OrthoFinder output from all 47 species
LOC_Os02g50640.1 LOC_Os02g50640 TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os07g33630.1 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.05 OrthoFinder output from all 47 species
Len_g10402 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Len_g10741 TOR1, CN, SPR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11054 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
MA_10436002g0010 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.05 OrthoFinder output from all 47 species
MA_185230g0010 No alias TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g24000.1 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species
Nbi_g11697 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.05 OrthoFinder output from all 47 species
Ore_g18540 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ppi_g31226 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Sam_g25224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo148739 TOR1, CN, SPR2 Microtubule-associated protein TORTIFOLIA1... 0.05 OrthoFinder output from all 47 species
Solyc10g006350.3.1 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.03 OrthoFinder output from all 47 species
Spa_g01750 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.04 OrthoFinder output from all 47 species
Tin_g13606 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Zm00001e010484_P001 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.04 OrthoFinder output from all 47 species
Zm00001e030903_P003 Zm00001e030903 TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e034876_P002 Zm00001e034876 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e035114_P002 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000278 mitotic cell cycle RCA Interproscan
BP GO:0006396 RNA processing RCA Interproscan
BP GO:0007275 multicellular organism development IMP Interproscan
MF GO:0008017 microtubule binding IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009826 unidimensional cell growth IMP Interproscan
CC GO:0010005 cortical microtubule, transverse to long axis IDA Interproscan
BP GO:0010031 circumnutation IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
BP GO:0001578 microtubule bundle formation IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005828 kinetochore microtubule IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010364 regulation of ethylene biosynthetic process IEP HCCA
BP GO:0010480 microsporocyte differentiation IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022403 cell cycle phase IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031109 microtubule polymerization or depolymerization IEP HCCA
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031113 regulation of microtubule polymerization IEP HCCA
BP GO:0031116 positive regulation of microtubule polymerization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0031334 positive regulation of protein-containing complex assembly IEP HCCA
BP GO:0031335 regulation of sulfur amino acid metabolic process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032273 positive regulation of protein polymerization IEP HCCA
BP GO:0032465 regulation of cytokinesis IEP HCCA
BP GO:0032467 positive regulation of cytokinesis IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042762 regulation of sulfur metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044089 positive regulation of cellular component biogenesis IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044848 biological phase IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046785 microtubule polymerization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048533 sporocyte differentiation IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051322 anaphase IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0051781 positive regulation of cell division IEP HCCA
BP GO:0060236 regulation of mitotic spindle organization IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
CC GO:0072686 mitotic spindle IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0090224 regulation of spindle organization IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:1900908 regulation of olefin metabolic process IEP HCCA
BP GO:1900911 regulation of olefin biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
BP GO:2000694 regulation of phragmoplast microtubule organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!