AT4G27090

Description : Ribosomal protein L14

Gene families : OG0002098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002098_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G27090

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00164470	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.19	OrthoFinder output from all 47 species
AMTR_s00067p00096180	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.23	OrthoFinder output from all 47 species
Adi_g022478	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Adi_g022479	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Adi_g083499	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Adi_g111231	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g00358	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g21502	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.19	OrthoFinder output from all 47 species
Als_g22155	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Aob_g06858	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g02342	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.18	OrthoFinder output from all 47 species
Aop_g06833	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Azfi_s0046.g030206	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Azfi_s0063.g035376	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.16	OrthoFinder output from all 47 species
Cba_g09965	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ceric.19G039800.1	Ceric.19G039800	component *(eL14) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Ceric.27G036100.1	Ceric.27G036100	component *(eL14) of large ribosomal-subunit (LSU)...	0.13	OrthoFinder output from all 47 species
Ceric.32G029000.1	Ceric.32G029000	component *(eL14) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.50	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.29	OrthoFinder output from all 47 species
Cre17.g701200	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.29	OrthoFinder output from all 47 species
Dac_g00245	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Dac_g24709	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.26	OrthoFinder output from all 47 species
Dcu_g04314	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.22	OrthoFinder output from all 47 species
Ehy_g00127	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
GSVIVT01012876001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.25	OrthoFinder output from all 47 species
GSVIVT01027844001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.2	OrthoFinder output from all 47 species
Gb_21078	No alias	component RPL14 of LSU proteome component	0.2	OrthoFinder output from all 47 species
LOC_Os02g40880.1	LOC_Os02g40880	component RPL14 of LSU proteome component	0.34	OrthoFinder output from all 47 species
Len_g32744	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
MA_10434733g0010	No alias	component RPL14 of LSU proteome component	0.18	OrthoFinder output from all 47 species
MA_37009g0010	No alias	component RPL14 of LSU proteome component	0.07	OrthoFinder output from all 47 species
MA_99106g0010	No alias	component RPL14 of LSU proteome component	0.24	OrthoFinder output from all 47 species
Mp8g17070.1	No alias	component RPL14 of LSU proteome component	0.27	OrthoFinder output from all 47 species
Msp_g12121	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Nbi_g01610	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Ore_g03641	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pir_g09914	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Pp3c15_5860V3.1	Pp3c15_5860	Ribosomal protein L14	0.21	OrthoFinder output from all 47 species
Pp3c24_20890V3.1	Pp3c24_20890	Ribosomal protein L14	0.23	OrthoFinder output from all 47 species
Ppi_g27765	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g11819	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.15	OrthoFinder output from all 47 species
Sam_g31107	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Sam_g38083	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.19	OrthoFinder output from all 47 species
Smo403602	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.22	OrthoFinder output from all 47 species
Solyc06g008260.3.1	Solyc06g008260	component RPL14 of LSU proteome component	0.29	OrthoFinder output from all 47 species
Solyc06g083820.3.1	Solyc06g083820	component RPL14 of LSU proteome component	0.14	OrthoFinder output from all 47 species
Solyc09g066430.3.1	Solyc09g066430	component RPL14 of LSU proteome component	0.32	OrthoFinder output from all 47 species
Spa_g10974	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.16	OrthoFinder output from all 47 species
Spa_g16062	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.18	OrthoFinder output from all 47 species
Spa_g16063	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.15	OrthoFinder output from all 47 species
Spa_g23759	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Spa_g28088	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Tin_g13393	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Zm00001e010296_P001	Zm00001e010296	component RPL14 of LSU proteome component	0.23	OrthoFinder output from all 47 species
Zm00001e034932_P003	Zm00001e034932	component RPL14 of LSU proteome component	0.21	OrthoFinder output from all 47 species
Zm00001e041233_P002	Zm00001e041233	component RPL14 of LSU proteome component	0.21	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005840	ribosome	ISS	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006412	translation	ISS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0015934	large ribosomal subunit	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
CC	GO:0022625	cytosolic large ribosomal subunit	IDA	Interproscan
CC	GO:0022626	cytosolic ribosome	IDA	Interproscan
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0032259	methylation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042254	ribosome biogenesis	ISS	Interproscan
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	IEP	HCCA
CC	GO:0000785	chromatin	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
BP	GO:0016572	obsolete histone phosphorylation	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	HCCA
MF	GO:0030527	structural constituent of chromatin	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0042274	ribosomal small subunit biogenesis	IEP	HCCA
BP	GO:0048284	organelle fusion	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002784	Ribosomal_L14e_dom	45	117

External Links

No external refs found!

AT4G27090

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation