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AT4G27280


Description : Calcium-binding EF-hand family protein


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00234p00014000 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AMTR_s00234p00015090 evm_27.TU.AmTr_v1... Calcium-binding protein KIC OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g087432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05269 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g09810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59479 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70045 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene49045.t1 PBP1, Aspi01Gene49045 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49046.t1 PBP1, Aspi01Gene49046 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49047.t1 PBP1, Aspi01Gene49047 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63044.t1 PBP1, Aspi01Gene63044 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63057.t1 PBP1, Aspi01Gene63057 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63068.t1 PBP1, Aspi01Gene63068 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G067100.1 PBP1, Ceric.18G067100 not classified & original description: pacid=50622258... 0.03 OrthoFinder output from all 47 species
Ceric.24G000200.1 Ceric.24G000200 not classified & original description: pacid=50629224... 0.06 OrthoFinder output from all 47 species
Ceric.24G000300.1 Ceric.24G000300 not classified & original description: pacid=50628799... 0.05 OrthoFinder output from all 47 species
Ceric.30G059500.1 PBP1, Ceric.30G059500 not classified & original description: pacid=50608497... 0.04 OrthoFinder output from all 47 species
Ceric.30G059700.1 PBP1, Ceric.30G059700 not classified & original description: pacid=50608022... 0.04 OrthoFinder output from all 47 species
Ceric.30G075500.1 Ceric.30G075500 not classified & original description: pacid=50608938... 0.04 OrthoFinder output from all 47 species
Ceric.30G075700.1 PBP1, Ceric.30G075700 not classified & original description: pacid=50608449... 0.05 OrthoFinder output from all 47 species
Ceric.30G075800.1 PBP1, Ceric.30G075800 not classified & original description: pacid=50608432... 0.04 OrthoFinder output from all 47 species
Ceric.30G075900.1 PBP1, Ceric.30G075900 not classified & original description: pacid=50609408... 0.05 OrthoFinder output from all 47 species
Dac_g21484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014539001 PBP1 Calcium-binding protein KRP1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_17267 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_30620 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os06g46950.1 LOC_Os06g46950 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Len_g01599 PBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10212526g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_1999194g0010 No alias Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_25900g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
MA_25900g0020 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_32393g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_48747g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_7489059g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8085699g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g09603 PBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19618 PBP1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g36268 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09084 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57595 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12451 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g26313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25489 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020622 No alias not classified & original description: CDS=1-366 0.03 OrthoFinder output from all 47 species
Solyc02g079720.1.1 PBP1, Solyc02g079720 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc07g053050.1.1 Solyc07g053050 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.19 OrthoFinder output from all 47 species
Solyc10g006660.3.1 Solyc10g006660 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Solyc10g006700.1.1 Solyc10g006700 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.16 OrthoFinder output from all 47 species
Spa_g56723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013045_P001 Zm00001e013045 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e025269_P001 Zm00001e025269 Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009611 response to wounding RCA Interproscan
BP GO:0009612 response to mechanical stimulus RCA Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 50 103
No external refs found!