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  5. AT4G28400

AT4G28400


Description : Protein phosphatase 2C family protein


Gene families : OG0000578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28400

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00232020 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
AMTR_s00183p00042550 evm_27.TU.AmTr_v1... Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Adi_g001927 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061254 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086385 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111549 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00552 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37458 No alias clade F phosphatase & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g16189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37504 No alias clade F phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Als_g02436 No alias clade F phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g35554 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01123 PIA1 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70123 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10471.t1 Aspi01Gene10471 clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26768.t1 Aspi01Gene26768 clade F phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36047.t1 Aspi01Gene36047 clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015125 No alias clade F phosphatase & original description: CDS=264-1103 0.04 OrthoFinder output from all 47 species
Ceric.01G118400.1 Ceric.01G118400 clade F phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G076700.1 Ceric.07G076700 clade F phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g45070 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12953 No alias clade F phosphatase & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g32565 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03275 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05392 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06504 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020581001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 OrthoFinder output from all 47 species
GSVIVT01034268001 No alias Protein modification.dephosphorylation.serine/threonine... 0.06 OrthoFinder output from all 47 species
Gb_08517 No alias clade F phosphatase 0.06 OrthoFinder output from all 47 species
Len_g08442 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09950 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20848 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10109 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g02753 No alias clade F phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g07067 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09589 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24935 No alias clade F phosphatase & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g03622 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17258 PIA1 clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26452 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19301 No alias clade F phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19302 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28201 No alias clade F phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00561 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39711 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53344 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004351 No alias clade F phosphatase & original description: CDS=1-852 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011718 No alias clade F phosphatase & original description: CDS=155-994 0.04 OrthoFinder output from all 47 species
Solyc01g105280.3.1 Solyc01g105280 clade F phosphatase 0.04 OrthoFinder output from all 47 species
Solyc07g053760.4.1 Solyc07g053760 clade F phosphatase 0.03 OrthoFinder output from all 47 species
Solyc07g062970.3.1 Solyc07g062970 clade F phosphatase 0.04 OrthoFinder output from all 47 species
Spa_g07895 No alias clade F phosphatase & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g07896 No alias clade F phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17248 No alias clade F phosphatase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19235 No alias clade F phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23913 No alias clade F phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010471_P001 Zm00001e010471 clade F phosphatase 0.03 OrthoFinder output from all 47 species
Zm00001e041710_P002 Zm00001e041710 clade F phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004722 protein serine/threonine phosphatase activity ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
BP GO:0031347 regulation of defense response RCA Interproscan
BP GO:0031348 negative regulation of defense response RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022622 root system development IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 45 275
No external refs found!