AT4G29100

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G29100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00092220	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
AMTR_s00167p00019840	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AT1G31050	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.1	OrthoFinder output from all 47 species
AT3G20640	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g080195	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g30685	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14362	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g21207	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09878	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21733	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene71895.t1	Aspi01Gene71895	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.32G034500.1	Ceric.32G034500	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.32G036000.1	Ceric.32G036000	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.33G028900.1	Ceric.33G028900	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.33G029000.1	Ceric.33G029000	not classified & original description: pacid=50607112...	0.04	OrthoFinder output from all 47 species
Dac_g33543	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g02751	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g25638	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g46632	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09942	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10106	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g14173	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18517	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g29621	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01005301001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.06	OrthoFinder output from all 47 species
GSVIVT01016594001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
GSVIVT01018886001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
GSVIVT01038142001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.06	OrthoFinder output from all 47 species
Gb_06063	No alias	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Gb_07584	No alias	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Gb_33415	No alias	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Gb_40387	No alias	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
LOC_Os02g17680.1	LOC_Os02g17680	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os03g55220.1	LOC_Os03g55220	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os04g41570.2	LOC_Os04g41570	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
LOC_Os04g47810.1	LOC_Os04g47810	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
LOC_Os05g42180.1	LOC_Os05g42180	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os07g28890.1	LOC_Os07g28890	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Lfl_g10359	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Mp2g19970.1	No alias	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Msp_g10107	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g15621	No alias	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g25113	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g27626	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g37283	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g37653	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g51301	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09411	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g16504	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16505	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo117274	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.02	OrthoFinder output from all 47 species
Solyc02g079760.3.1	Solyc02g079760	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc02g084880.3.1	Solyc02g084880	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Solyc03g031450.3.1	Solyc03g031450	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc03g120530.3.1	Solyc03g120530	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Solyc04g080710.4.1	Solyc04g080710	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc06g066580.4.1	Solyc06g066580	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc07g020960.3.1	Solyc07g020960	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Solyc07g063830.3.1	Solyc07g063830	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc10g006640.3.1	Solyc10g006640	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e005748_P002	Zm00001e005748	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e007719_P001	Zm00001e007719	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e010350_P001	Zm00001e010350	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e016395_P001	Zm00001e016395	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Zm00001e031298_P001	Zm00001e031298	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e032055_P001	Zm00001e032055	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e034854_P002	Zm00001e034854	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0009830	cell wall modification involved in abscission	IEP	HCCA
BP	GO:0009900	dehiscence	IEP	HCCA
BP	GO:0009901	anther dehiscence	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
BP	GO:0010256	endomembrane system organization	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0044277	cell wall disassembly	IEP	HCCA
BP	GO:0046688	response to copper ion	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
MF	GO:0080107	8-methylthiopropyl glucosinolate S-oxygenase activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT4G29100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation