AT4G30270 (MERI5B, XTH24, SEN4, MERI-5)

Aliases : MERI5B, XTH24, SEN4, MERI-5

Description : xyloglucan endotransglucosylase/hydrolase 24

Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G30270

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017856	XTH8	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g129123	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g26877	TCH4, XTH22	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0068.g036411	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: CDS=34-1191	0.03	OrthoFinder output from all 47 species
Ceric.11G011400.1	XTH8, Ceric.11G011400	EC_2.4 glycosyltransferase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g09803	XTH13, AtXTH13	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g17778	XTH16	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g22613	XTR7, XTH15	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01029167001	XTR3, XTH25	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max	0.03	OrthoFinder output from all 47 species
Gb_22346	XTH16	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from all 47 species
Lfl_g41124	XTR7, XTH15	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g41125	XTH9	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
MA_11177g0010	XTR3, XTH25	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Nbi_g22921	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g24672	XTH7	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g15963	XTH6	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g36862	XTH6	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g17617	AtXTH12, XTH12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g099630.4.1	XTH5, EXGT-A4,...	Probable xyloglucan endotransglucosylase/hydrolase 1...	0.04	OrthoFinder output from all 47 species
Solyc12g098603.1.1	XTR7, XTH15,...	Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine...	0.04	OrthoFinder output from all 47 species
Spa_g49540	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g04099	XTH5, EXGT-A4	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e024774_P001	XTH26, ATXTH26,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Zm00001e036063_P001	XTH3, Zm00001e036063	Putative xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007568	aging	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009505	plant-type cell wall	IDA	Interproscan
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009739	response to gibberellin	IGI	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	TAS	Interproscan
BP	GO:0009741	response to brassinosteroid	IGI	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IDA	Interproscan
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	TAS	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	ISS	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010713	XET_C	221	265
IPR000757	GH16	26	205

External Links

No external refs found!

AT4G30270 (MERI5B, XTH24, SEN4, MERI-5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation