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AT4G30890 (UBP24)


Aliases : UBP24

Description : ubiquitin-specific protease 24


Gene families : OG0005424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30890

Target Alias Description ECC score Gene Family Method Actions
Als_g15857 UBP24 deubiquitinase *(UBP24) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34985.t2 UBP24, Aspi01Gene34985 deubiquitinase *(UBP24) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g13650.1 UBP24 deubiquitinase (UBP24) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006349 regulation of gene expression by genomic imprinting IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0016929 deSUMOylase activity IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0022619 generative cell differentiation IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044770 cell cycle phase transition IEP HCCA
BP GO:0044772 mitotic cell cycle phase transition IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0044843 cell cycle G1/S phase transition IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:2000036 regulation of stem cell population maintenance IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 197 548
No external refs found!