Description : copper ion binding
Gene families : OG0001835 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001835_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G32610 | |
| Cluster | HCCA: Cluster_24 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g11929 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g36601 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G058400.1 | Ceric.05G058400 | not classified & original description: pacid=50577638... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g09756 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01448 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35092 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01260 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29835 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37332 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo444781 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g018490.3.1 | Solyc05g018490 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g067880.4.1 | Solyc08g067880 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g150138.1.1 | Solyc08g150138 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07750 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e026841_P002 | Zm00001e026841 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005507 | copper ion binding | IDA | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| CC | GO:0005759 | mitochondrial matrix | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0000412 | histone peptidyl-prolyl isomerization | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | HCCA |
| BP | GO:0000725 | recombinational repair | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005527 | macrolide binding | IEP | HCCA |
| MF | GO:0005528 | FK506 binding | IEP | HCCA |
| CC | GO:0005794 | Golgi apparatus | IEP | HCCA |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0010165 | response to X-ray | IEP | HCCA |
| BP | GO:0010212 | response to ionizing radiation | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0048451 | petal formation | IEP | HCCA |
| BP | GO:0048453 | sepal formation | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
| CC | GO:1902911 | protein kinase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
