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  5. AT4G33970

AT4G33970


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G33970
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.06 OrthoFinder output from all 47 species
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.04 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.06 OrthoFinder output from all 47 species
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21238 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33154.t1 Aspi01Gene33154 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59063.t1 Aspi01Gene59063 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1965.g108394 No alias not classified & original description: CDS=1-1416 0.03 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g55943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g13913 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07517 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01171 LRX1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18979 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.13 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os01g25460.1 LOC_Os01g25460 LRR-domain extensin 0.1 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
LOC_Os12g35710.1 LOC_Os12g35710 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Len_g24034 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
MA_7188g0010 LRX2 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.04 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11374 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08931 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13602 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.03 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc01g108900.4.1 Solyc01g108900 LRR-domain extensin 0.08 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g006980.2.1 Solyc12g006980 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Solyc12g088950.3.1 Solyc12g088950 Pollen-specific leucine-rich repeat extensin-like... 0.05 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02020 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017627_P001 LRX2, Zm00001e017627 Pollen-specific leucine-rich repeat extensin-like... 0.04 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
MF GO:0050378 UDP-glucuronate 4-epimerase activity IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
CC GO:0051286 cell tip IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
CC GO:0060187 cell pole IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!