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  5. AT4G34680

AT4G34680 (GATA3)


Aliases : GATA3

Description : GATA transcription factor 3


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34680
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00254680 GATA22, CGA1,... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00253850 HAN, MNP,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00017p00242860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00106p00136770 GATA4,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00049970 BME3-ZF, BME3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT2G45050 GATA2 GATA transcription factor 2 0.04 OrthoFinder output from all 47 species
AT3G60530 GATA4 GATA transcription factor 4 0.04 OrthoFinder output from all 47 species
Adi_g014934 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016252 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021303 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022369 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036776 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058312 GATA4 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082687 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116352 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01113 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32134 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09430 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11283 GATA4 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12533 GATA5 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g20978 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38669 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52135 GATA5 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g12583 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10302.t2 GATA23, Aspi01Gene10302 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67105.t1 GATA5, Aspi01Gene67105 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69106.t1 GATA4, Aspi01Gene69106 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69371.t1 GATA12, Aspi01Gene69371 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015592 GATA20 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g02619 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38063 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G070700.1 GATA20, Ceric.04G070700 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G072600.1 GATA9, Ceric.07G072600 transcription factor *(A/B-GATA) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.27G027400.1 GATA12, Ceric.27G027400 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G025300.1 GATA20, Ceric.35G025300 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Cre01.g025050 GATA23 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Dac_g00642 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11064 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04522 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06887 GATA2 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07436 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11115 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12986 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18881 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06344 GATA5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06867 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26819 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26857 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018180001 GATA4 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Gb_25568 GATA20 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Gb_34837 GATA20 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
LOC_Os02g12790.1 GATA22, CGA1,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os02g56250.1 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os06g37450.1 GATA22, CGA1,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os09g08150.1 LOC_Os09g08150 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g32070.1 GATA1, LOC_Os10g32070 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os12g07120.1 GATA14, LOC_Os12g07120 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
LOC_Os12g42970.1 GATA4, LOC_Os12g42970 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Len_g16587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24180 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12909 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434815g0010 GATA4 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Msp_g19890 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26719 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30519 GATA2 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09526 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22038 GATA11 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g24351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09627 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25103 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05839 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072 GATA4 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909 GATA9 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025929 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g08124 No alias transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g062760.4.1 HAN, MNP,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc02g085190.2.1 HAN, MNP,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Solyc05g053500.4.1 GATA1, Solyc05g053500 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Solyc08g066510.3.1 GATA12, Solyc08g066510 transcription factor (GATA) 0.06 OrthoFinder output from all 47 species
Solyc10g018560.2.1 GATA4, Solyc10g018560 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
Spa_g16103 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30606 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005940_P001 GATA4, Zm00001e005940 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e016165_P001 BME3-ZF, BME3,... transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e026256_P001 GATA23, Zm00001e026256 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Zm00001e037876_P002 GATA4, Zm00001e037876 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005730 nucleolus IDA Interproscan
BP GO:0007623 circadian rhythm IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004301 epoxide hydrolase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004575 sucrose alpha-glucosidase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
CC GO:0005955 calcineurin complex IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005987 sucrose catabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006971 hypotonic response IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009313 oligosaccharide catabolic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010254 nectary development IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0010334 sesquiterpene synthase activity IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016207 4-coumarate-CoA ligase activity IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016801 hydrolase activity, acting on ether bonds IEP HCCA
MF GO:0016803 ether hydrolase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019605 butyrate metabolic process IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
BP GO:0030007 cellular potassium ion homeostasis IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
MF GO:0034002 (R)-limonene synthase activity IEP HCCA
MF GO:0034768 (E)-beta-ocimene synthase activity IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042214 terpene metabolic process IEP HCCA
BP GO:0042539 hypotonic salinity response IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043692 monoterpene metabolic process IEP HCCA
BP GO:0043693 monoterpene biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0046246 terpene biosynthetic process IEP HCCA
BP GO:0046352 disaccharide catabolic process IEP HCCA
BP GO:0046459 short-chain fatty acid metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0047760 butyrate-CoA ligase activity IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
MF GO:0050550 pinene synthase activity IEP HCCA
MF GO:0050551 myrcene synthase activity IEP HCCA
MF GO:0050552 (4S)-limonene synthase activity IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051761 sesquiterpene metabolic process IEP HCCA
BP GO:0051762 sesquiterpene biosynthetic process IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0071836 nectar secretion IEP HCCA
MF GO:0080015 sabinene synthase activity IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 182 215
No external refs found!