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  5. AT4G34880

AT4G34880


Description : Amidase family protein


Gene families : OG0004248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00215440 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cba_g35121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024069001 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_24947 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g10410.1 LOC_Os04g10410 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g10434.1 LOC_Os04g10434 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g10569.1 LOC_Os04g10569 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g025994 No alias not classified & original description: CDS=1-1410 0.03 OrthoFinder output from all 47 species
Smo172412 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g111210.3.1 Solyc01g111210 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc01g111220.3.1 Solyc01g111220 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004040 amidase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000014 single-stranded DNA endodeoxyribonuclease activity IEP HCCA
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0004351 glutamate decarboxylase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004520 endodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
MF GO:0043765 T/G mismatch-specific endonuclease activity IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
MF GO:0050284 sinapate 1-glucosyltransferase activity IEP HCCA
BP GO:0050898 nitrile metabolic process IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080028 nitrile biosynthetic process IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 182 401
IPR023631 Amidase_dom 62 170
No external refs found!