Description : SBP (S-ribonuclease binding protein) family protein
Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G10650 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g039740 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08224 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05481 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g02764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12707 | SBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013266001 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01024021001 | No alias | Probable BOI-related E3 ubiquitin-protein ligase 2... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_20681 | No alias | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g34020.1 | RING, LOC_Os11g34020 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g24070.1 | No alias | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03464 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06360 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g111610.3.1 | Solyc01g111610 | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | HCCA |
| MF | GO:0004620 | phospholipase activity | IEP | HCCA |
| MF | GO:0004629 | phospholipase C activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005635 | nuclear envelope | IEP | HCCA |
| CC | GO:0005856 | cytoskeleton | IEP | HCCA |
| BP | GO:0006312 | mitotic recombination | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
| BP | GO:0009269 | response to desiccation | IEP | HCCA |
| BP | GO:0009631 | cold acclimation | IEP | HCCA |
| BP | GO:0009734 | auxin-activated signaling pathway | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009956 | radial pattern formation | IEP | HCCA |
| BP | GO:0010074 | maintenance of meristem identity | IEP | HCCA |
| BP | GO:0010080 | regulation of floral meristem growth | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010492 | maintenance of shoot apical meristem identity | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0015629 | actin cytoskeleton | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019321 | pentose metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0035265 | organ growth | IEP | HCCA |
| BP | GO:0042732 | D-xylose metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051645 | Golgi localization | IEP | HCCA |
| BP | GO:0051646 | mitochondrion localization | IEP | HCCA |
| BP | GO:0060151 | peroxisome localization | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0060771 | phyllotactic patterning | IEP | HCCA |
| BP | GO:0060772 | leaf phyllotactic patterning | IEP | HCCA |
| BP | GO:0060774 | auxin mediated signaling pathway involved in phyllotactic patterning | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
