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  5. AT4G35390

AT4G35390 (AGF1)


Aliases : AGF1

Description : AT-hook protein of GA feedback 1


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G35390

Target Alias Description ECC score Gene Family Method Actions
AT1G20900 AHL27, ORE7, ESC Predicted AT-hook DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT4G12050 No alias Predicted AT-hook DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g002846 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055780 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058667 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22543 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23177 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26160 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16583 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35094 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37574 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29083 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13410.t1 AHL22, Aspi01Gene13410 AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36324.t1 Aspi01Gene36324 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44753.t1 Aspi01Gene44753 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014255 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g04471 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45065 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G090400.1 AHL20, Ceric.03G090400 AHL clade-B transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.04G093400.1 Ceric.04G093400 AHL clade-A transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.07G054400.1 Ceric.07G054400 AHL clade-A transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.32G001500.1 Ceric.32G001500 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G019000.1 Ceric.38G019000 AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.38G024400.1 GIK, Ceric.38G024400 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13007 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27973 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26399 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27436 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31564 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016497001 AHL15, AGF2 AT-hook motif nuclear-localized protein 15... 0.03 OrthoFinder output from all 47 species
Gb_34320 AHL22 AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16350.1 AHL22, LOC_Os03g16350 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
LOC_Os04g50030.1 LOC_Os04g50030 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
LOC_Os08g06320.1 LOC_Os08g06320 AT-hook motif nuclear-localized protein 23... 0.04 OrthoFinder output from all 47 species
LOC_Os08g44910.1 AHL20, LOC_Os08g44910 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28930.1 LOC_Os09g28930 AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
Len_g04698 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_12232g0010 No alias AT-hook motif nuclear-localized protein 20... 0.06 OrthoFinder output from all 47 species
MA_19068g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.04 OrthoFinder output from all 47 species
MA_19693g0010 AHL20 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_284g0020 AHL22 AT-hook motif nuclear-localized protein 23... 0.04 OrthoFinder output from all 47 species
MA_291092g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
MA_41289g0010 GIK AT-hook motif nuclear-localized protein 17... 0.02 OrthoFinder output from all 47 species
MA_77661g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08085 AHL20 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12905 GIK AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20341 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25533 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29316 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29204 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41048 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05146 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12074 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15851 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005976 No alias AHL clade-A transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015561 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0247.g026708 No alias AHL clade-A transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Solyc08g007560.3.1 AHL22, Solyc08g007560 AT-hook motif nuclear-localized protein 22... 0.05 OrthoFinder output from all 47 species
Solyc08g077010.1.1 Solyc08g077010 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Tin_g00815 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009975_P001 Zm00001e009975 AT-hook motif nuclear-localized protein 17... 0.04 OrthoFinder output from all 47 species
Zm00001e021704_P001 Zm00001e021704 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e024863_P001 AHL22, Zm00001e024863 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e034398_P001 Zm00001e034398 AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
Zm00001e036564_P001 AHL22, Zm00001e036564 AT-hook motif nuclear-localized protein 22... 0.04 OrthoFinder output from all 47 species
Zm00001e036953_P001 AHL27, ORE7,... AT-hook motif nuclear-localized protein 21... 0.03 OrthoFinder output from all 47 species
Zm00001e040207_P002 Zm00001e040207 AT-hook motif nuclear-localized protein 21... 0.02 OrthoFinder output from all 47 species
Zm00001e041402_P001 Zm00001e041402 AT-hook motif nuclear-localized protein 21... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IDA Interproscan
CC GO:0005634 nucleus IDA Interproscan
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0033356 UDP-L-arabinose metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
MF GO:0052691 UDP-arabinopyranose mutase activity IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 91 205
No external refs found!