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AT4G37540 (LBD39)


Aliases : LBD39

Description : LOB domain-containing protein 39


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G37540

Target Alias Description ECC score Gene Family Method Actions
Adi_g041713 LBD37, ASL39 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14411 LBD38 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g32770.1 LBD41, LOC_Os01g32770 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g41330.1 LBD37, ASL39,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Lfl_g17424 LBD38 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_70989g0010 LBD40 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Mp3g12980.1 LBD37, ASL39 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Ore_g04638 LBD39 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027417_P001 LBD41, Zm00001e027417 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e032150_P001 LBD41, Zm00001e032150 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0016126 sterol biosynthetic process RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004851 uroporphyrin-III C-methyltransferase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006566 threonine metabolic process IEP HCCA
BP GO:0006567 threonine catabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006809 nitric oxide biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008169 C-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
MF GO:0008940 nitrate reductase activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009068 aspartate family amino acid catabolic process IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019354 siroheme biosynthetic process IEP HCCA
MF GO:0030611 arsenate reductase activity IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046156 siroheme metabolic process IEP HCCA
BP GO:0046209 nitric oxide metabolic process IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0060776 simple leaf morphogenesis IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!