AT4G37590 (NPY5)

Aliases : NPY5

Description : Phototropic-responsive NPH3 family protein

Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37590

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00211770	MAB4, NPY1, ENP,...	BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Adi_g088538	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Ala_g21688	RPT3, NPH3, JK218	substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin...	0.02	OrthoFinder output from all 47 species
Ala_g32547	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Als_g08124	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Azfi_s0076.g037787	No alias	not classified & original description: CDS=431-2302	0.03	OrthoFinder output from all 47 species
Ceric.32G010700.1	Ceric.32G010700	not classified & original description: pacid=50597870...	0.04	OrthoFinder output from all 47 species
Ceric.34G006100.1	Ceric.34G006100	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Dcu_g07068	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
GSVIVT01000130001	NPY2	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01037852001	NPY2	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_32606	No alias	BTB/POZ domain-containing protein At1g67900...	0.02	OrthoFinder output from all 47 species
LOC_Os03g10800.2	NPY2, LOC_Os03g10800	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Nbi_g10804	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ppi_g03129	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sam_g36660	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g38846	No alias	substrate adaptor of CUL3-based E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Solyc02g092480.4.1	NPY2, Solyc02g092480	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc10g049660.2.1	NPY2, Solyc10g049660	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Zm00001e003063_P004	NPY2, Zm00001e003063	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e008748_P001	RPT3, NPH3,...	Coleoptile phototropism protein 1 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0004871	obsolete signal transducer activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	ISS	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009908	flower development	IGI	Interproscan
BP	GO:0009958	positive gravitropism	IGI	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0071944	cell periphery	IDA	Interproscan
BP	GO:0090567	reproductive shoot system development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	HCCA
CC	GO:0005853	eukaryotic translation elongation factor 1 complex	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0010962	regulation of glucan biosynthetic process	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	HCCA
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0032950	regulation of beta-glucan metabolic process	IEP	HCCA
BP	GO:0032951	regulation of beta-glucan biosynthetic process	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0070726	cell wall assembly	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071668	plant-type cell wall assembly	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2001006	regulation of cellulose biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027356	NPH3_dom	214	441
IPR000210	BTB/POZ_dom	25	128

External Links

No external refs found!

AT4G37590 (NPY5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation