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AT4G39220 (ATRER1A)


Aliases : ATRER1A

Description : Rer1 family protein


Gene families : OG0001450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00210110 ATRER1A,... Protein RER1A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g053701 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Aev_g16338 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Als_g36499 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g39321 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
MA_36826g0020 RER1B, ATRER1B Protein RER1B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009765 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014474 ATRER1A membrane protein cargo receptor *(RER1) & original... 0.04 OrthoFinder output from all 47 species
Smo438307 ATRER1A Protein RER1A OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g109770.3.1 RER1B, ATRER1B,... Protein RER1B OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Zm00001e017155_P001 ATRER1A, Zm00001e017155 Protein RER1A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e025626_P001 ATRER1A, Zm00001e025626 Protein RER1A OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IMP Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000254 C-4 methylsterol oxidase activity IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080065 4-alpha-methyl-delta7-sterol oxidation IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0098754 detoxification IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR004932 Rer1 19 181
No external refs found!