No description available
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G01305 | |
| Cluster | HCCA: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00241810 | CIB1,... | External stimuli response.light.UV-A/blue... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00146370 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G29950 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G51140 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00120 | GT140, IND1, IND, EDA33 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G28811 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G36930 | SPT | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G09750 | HEC3 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G64980 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G67110 | ALC | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g048981 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03333 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17433 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g09007 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09420 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g49595 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g61959 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g18590 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g40845 | SPT | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g17948 | LRL3 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene05629.t1 | LRL3, Aspi01Gene05629 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene32584.t1 | LRL3, Aspi01Gene32584 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35112.t2 | SPT, Aspi01Gene35112 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46202.t1 | Aspi01Gene46202 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene63646.t1 | LRL3, Aspi01Gene63646 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0043.g026959 | No alias | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0083.g038807 | HEC1 | bHLH-type transcription factor & original description: CDS=1-1287 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s2566.g112182 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G038900.1 | LRL3, Ceric.04G038900 | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G045500.1 | Ceric.04G045500 | bHLH-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G074300.1 | Ceric.22G074300 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g41029 | RSL2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g09859 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g25890 | RHD6 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15552 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03657 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05767 | No alias | regulatory protein (CIB) of blue light perception &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08372 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09150 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16366 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000717001 | UNE12 | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007389001 | No alias | External stimuli response.light.UV-A/blue... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011873001 | No alias | External stimuli response.light.UV-A/blue... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01030846001 | RHD6 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06182 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22201 | LRL3 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36369 | BPEp, ZCW32, BPE, BPEub | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g61480.1 | LOC_Os01g61480 | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g39140.1 | LOC_Os02g39140 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g55250.1 | LRL3, LOC_Os02g55250 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g10770.1 | RSL2, LOC_Os03g10770 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g41229.1 | LOC_Os04g41229 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g47980.1 | LOC_Os06g47980 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g25040.1 | LRL1, LOC_Os09g25040 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g28210.1 | HEC1, LOC_Os09g28210 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04933 | HEC2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432919g0010 | CIB1 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_158850g0010 | LRL3 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| MA_26114g0010 | SPT | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_306658g0010 | No alias | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| MA_83500g0010 | HEC1 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| MA_88831g0010 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18521 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46877 | RSL2 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g01184 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11326 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g01951 | UNE12 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10627 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g39906 | PIL1 | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g27016 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g33766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02784 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62088 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007103 | HEC1 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g011126 | SPT | bHLH-type transcription factor & original description: CDS=1-1488 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g36377 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo405220 | HEC1 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g093280.2.1 | SPT, Solyc02g093280 | transcription factor (bHLH) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc03g097820.2.1 | Solyc03g097820 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g006650.3.1 | Solyc05g006650 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g072520.2.1 | Solyc06g072520 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g083170.3.1 | Solyc06g083170 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g005070.1.1 | Solyc09g005070 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g010170.2.1 | LRL1, Solyc12g010170 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03670 | RSL2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14752 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26254 | CIB1 | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39495 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41479 | RSL2 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g39809 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009823_P002 | LRL1, Zm00001e009823 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010540_P001 | Zm00001e010540 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011084_P002 | Zm00001e011084 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e011866_P002 | UNE12, Zm00001e011866 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015045_P002 | Zm00001e015045 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019392_P001 | Zm00001e019392 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021883_P001 | HEC3, Zm00001e021883 | transcription factor (bHLH) | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e030725_P001 | Zm00001e030725 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032280_P001 | Zm00001e032280 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e032950_P002 | UNE12, Zm00001e032950 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034339_P001 | HEC1, Zm00001e034339 | transcription factor (bHLH) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034446_P001 | CIB5, Zm00001e034446 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036318_P001 | LRL1, Zm00001e036318 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041668_P001 | PIL5, PIF1,... | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006869 | lipid transport | IEP | HCCA |
| BP | GO:0009410 | response to xenobiotic stimulus | IEP | HCCA |
| BP | GO:0009648 | photoperiodism | IEP | HCCA |
| BP | GO:0009799 | specification of symmetry | IEP | HCCA |
| BP | GO:0009855 | determination of bilateral symmetry | IEP | HCCA |
| BP | GO:0010014 | meristem initiation | IEP | HCCA |
| BP | GO:0010073 | meristem maintenance | IEP | HCCA |
| BP | GO:0010199 | organ boundary specification between lateral organs and the meristem | IEP | HCCA |
| BP | GO:0048573 | photoperiodism, flowering | IEP | HCCA |
| BP | GO:0048859 | formation of anatomical boundary | IEP | HCCA |
| BP | GO:0090691 | formation of plant organ boundary | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
