AT5G03150 (JKD)

Aliases : JKD

Description : C2H2-like zinc finger protein

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G03150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00204520	IDD2, AtIDD2,...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	OrthoFinder output from all 47 species
AT1G03840	MGP	C2H2 and C2HC zinc fingers superfamily protein	0.03	OrthoFinder output from all 47 species
AT1G55110	AtIDD7, IDD7	indeterminate(ID)-domain 7	0.04	OrthoFinder output from all 47 species
Adi_g044340	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g068284	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04829	IDD16, AtIDD16	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ala_g02498	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g18581	JKD	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17401	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g21518	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene31986.t1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.01G010300.1	IDD16, AtIDD16,...	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.14G021500.1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.17G030700.1	MGP, Ceric.17G030700	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.33G056300.1	IDD2, AtIDD2,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g11011	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g28879	MGP	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01035391001	AtIDD7, IDD7	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	OrthoFinder output from all 47 species
Gb_24099	IDD2, AtIDD2	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os01g09850.1	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os01g14010.1	MGP, LOC_Os01g14010	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Len_g31581	AtIDD12, IDD12	C2H2 subclass IDD transcription factor & original...	0.05	OrthoFinder output from all 47 species
Lfl_g30618	MGP	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g30300	AtIDD7, IDD7	C2H2 subclass IDD transcription factor & original...	0.05	OrthoFinder output from all 47 species
Pnu_g09916	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g28092	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ppi_g09226	MGP	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020376	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc01g005060.3.1	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Solyc03g098070.3.1	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc06g072360.3.1	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Spa_g18118	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e003968_P002	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e026143_P001	MGP, Zm00001e026143	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e027791_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010075	regulation of meristem growth	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030856	regulation of epithelial cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IPI	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045604	regulation of epidermal cell differentiation	IMP	Interproscan
BP	GO:0045682	regulation of epidermis development	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048527	lateral root development	RCA	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051302	regulation of cell division	IMP	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013087	Znf_C2H2_type	82	104

External Links

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AT5G03150 (JKD)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation