1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G03180

AT5G03180


Description : RING/U-box superfamily protein


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G03180

Target Alias Description ECC score Gene Family Method Actions
Als_g33633 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g03498 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07298.t1 Aspi01Gene07298 E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene64445.t1 Aspi01Gene64445 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19756 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 247 294
No external refs found!