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  5. AT5G04230

AT5G04230 (PAL3, ATPAL3)


Aliases : PAL3, ATPAL3

Description : phenyl alanine ammonia-lyase 3


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G04230

Target Alias Description ECC score Gene Family Method Actions
Adi_g014959 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059316 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01488 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37684 ATPAL1, PAL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g39212 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05558.t1 PAL4, Aspi01Gene05558 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0096.g043679 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2310 0.06 OrthoFinder output from all 47 species
Dcu_g01768 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24302 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33771 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024299001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01024305001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 OrthoFinder output from all 47 species
GSVIVT01024306001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01024315001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43800.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Msp_g31510 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43454 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06459 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08420 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15973 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c22_17310V3.1 Pp3c22_17310 phenyl alanine ammonia-lyase 3 0.01 OrthoFinder output from all 47 species
Pp3c7_24510V3.1 PAL3, ATPAL3, Pp3c7_24510 phenylalanine ammonia-lyase 4 0.01 OrthoFinder output from all 47 species
Spa_g26458 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023031_P002 PAL4, Zm00001e023031 phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006952 defense response TAS Interproscan
BP GO:0009611 response to wounding TAS Interproscan
BP GO:0016556 mRNA modification RCA Interproscan
MF GO:0045548 phenylalanine ammonia-lyase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009682 induced systemic resistance IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010438 cellular response to sulfur starvation IEP HCCA
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0042762 regulation of sulfur metabolic process IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 51 524
No external refs found!