Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Gene families : OG0001166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G04860 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0054.g033618 | No alias | not classified & original description: CDS=121-2442 | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g38308 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03511 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017954_P001 | Zm00001e017954 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| CC | GO:0005739 | mitochondrion | IDA | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| CC | GO:0005884 | actin filament | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006865 | amino acid transport | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009698 | phenylpropanoid metabolic process | IEP | HCCA |
| BP | GO:0009699 | phenylpropanoid biosynthetic process | IEP | HCCA |
| BP | GO:0009804 | coumarin metabolic process | IEP | HCCA |
| BP | GO:0009805 | coumarin biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009962 | regulation of flavonoid biosynthetic process | IEP | HCCA |
| BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0047262 | polygalacturonate 4-alpha-galacturonosyltransferase activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0099080 | supramolecular complex | IEP | HCCA |
| CC | GO:0099081 | supramolecular polymer | IEP | HCCA |
| CC | GO:0099512 | supramolecular fiber | IEP | HCCA |
| CC | GO:0099513 | polymeric cytoskeletal fiber | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019448 | NT-C2 | 18 | 186 |
| No external refs found! |
