1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G05830

AT5G05830


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G05830

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00182780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g06625 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007260 No alias not classified & original description: CDS=1-507 0.04 OrthoFinder output from all 47 species
Tin_g14984 No alias E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 79 130
No external refs found!