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  5. AT5G06150

AT5G06150 (CYCB1;2, CYC1BAT)


Aliases : CYCB1;2, CYC1BAT

Description : Cyclin family protein


Gene families : OG0000745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G06150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 CYCB2;3,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.04 OrthoFinder output from all 47 species
AMTR_s00101p00131830 CYCB1;1, CYCB1,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 OrthoFinder output from all 47 species
AT1G16330 CYCB3;1 cyclin b3;1 0.05 OrthoFinder output from all 47 species
Adi_g082397 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aev_g38549 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aev_g40209 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g23920 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Als_g15872 CYCB1;2, CYC1BAT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16595 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g29465 CYCB1;2, CYC1BAT regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g58773 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g07135 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11290.t1 CYCB2;3, Aspi01Gene11290 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0230.g059168 CYCB2;4 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Cba_g13706 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.06G046300.1 CYCB2;3, Ceric.06G046300 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G071600.1 CYCB2;3, Ceric.18G071600 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ceric.21G047800.1 CYCB2;3, Ceric.21G047800 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.24G055000.1 CYCB2;3, Ceric.24G055000 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.26G002300.1 CYCB2;3, Ceric.26G002300 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G034200.1 CYCB2;3, Ceric.31G034200 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000769.38 CYCB2;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021312.11 CYCB2;2 G2/mitotic-specific cyclin S13-6 OS=Glycine max 0.03 OrthoFinder output from all 47 species
Cre08.g370401 CYCB2;2 Cyclin-B2-2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Dac_g17049 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01163 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g03733 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08761 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01009895001 CYCB2;3 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 OrthoFinder output from all 47 species
GSVIVT01025781001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 OrthoFinder output from all 47 species
Gb_01761 CYCB3;1 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Gb_10664 CYCB2;3 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Len_g05365 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Len_g11919 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Len_g56071 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Lfl_g25818 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
MA_10428837g0030 CYCB1;3, CYC2 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
MA_10433093g0020 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species
MA_311439g0010 CYCB1;3, CYC2 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
MA_855375g0010 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
Mp5g10030.1 CYCB2;2 cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Msp_g07854 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Msp_g21114 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Msp_g42899 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Nbi_g03000 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04270 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g12194 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g31931 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025884 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Sam_g24353 No alias regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Smo230742 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.02 OrthoFinder output from all 47 species
Solyc04g081660.3.1 CYCB2;4, Solyc04g081660 Cyclin-B2-4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g082430.3.1 CYCB2;4, Solyc04g082430 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Spa_g04211 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Spa_g23146 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Spa_g50231 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Spa_g52264 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g53648 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Tin_g05068 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Tin_g12417 CYCB2;4 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e007244_P001 CYCB2;3, Zm00001e007244 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Zm00001e019528_P002 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Zm00001e025467_P001 CYCB1;2,... Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e027336_P001 CYCB1;2,... cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Zm00001e028899_P002 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Zm00001e030146_P001 CYCB2;3, Zm00001e030146 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0010332 response to gamma radiation IEP Interproscan
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0005819 spindle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006469 negative regulation of protein kinase activity IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030332 cyclin binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033673 negative regulation of kinase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035173 histone kinase activity IEP HCCA
MF GO:0035174 histone serine kinase activity IEP HCCA
MF GO:0035175 histone H3S10 kinase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0043987 obsolete histone H3-S10 phosphorylation IEP HCCA
BP GO:0043988 obsolete histone H3-S28 phosphorylation IEP HCCA
MF GO:0044022 histone H3S28 kinase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051348 negative regulation of transferase activity IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:0071901 negative regulation of protein serine/threonine kinase activity IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 312 427
IPR006671 Cyclin_N 185 309
No external refs found!