AT5G07340

Description : Calreticulin family protein

Gene families : OG0001202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001202_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G07340

Target	Alias	Description	ECC score	Gene Family Method
Adi_g056898	CNX1, ATCNX1	membrane-anchored lectin chaperone *(CNX) & original...	0.03	OrthoFinder output from all 47 species
Adi_g074280	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g05578	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0003.g007906	CNX1, ATCNX1	membrane-anchored lectin chaperone *(CNX) & original...	0.12	OrthoFinder output from all 47 species
Cba_g00973	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.03	OrthoFinder output from all 47 species
Ceric.38G034600.1	Ceric.38G034600	membrane-anchored lectin chaperone *(CNX) & original...	0.04	OrthoFinder output from all 47 species
Dac_g22330	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g07530	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.1	OrthoFinder output from all 47 species
Dcu_g11352	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.05	OrthoFinder output from all 47 species
Dde_g12169	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.04	OrthoFinder output from all 47 species
Dde_g22160	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.06	OrthoFinder output from all 47 species
GSVIVT01005680001	CNX1, ATCNX1	Calnexin homolog OS=Helianthus tuberosus	0.17	OrthoFinder output from all 47 species
LOC_Os04g32950.1	LOC_Os04g32950	lectin chaperone (CNX)	0.36	OrthoFinder output from all 47 species
Len_g09690	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g41023	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.19	OrthoFinder output from all 47 species
MA_10427968g0010	No alias	lectin chaperone (CNX)	0.03	OrthoFinder output from all 47 species
Mp4g06370.1	No alias	lectin chaperone (CNX)	0.03	OrthoFinder output from all 47 species
Nbi_g27538	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.11	OrthoFinder output from all 47 species
Ore_g29964	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g18826	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.02	OrthoFinder output from all 47 species
Solyc03g118040.3.1	CNX1, ATCNX1,...	lectin chaperone (CNX)	0.05	OrthoFinder output from all 47 species
Spa_g23497	CNX1, ATCNX1	membrane-anchored lectin chaperone *(CNX) & original...	0.11	OrthoFinder output from all 47 species
Spa_g48185	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.08	OrthoFinder output from all 47 species
Tin_g06068	No alias	membrane-anchored lecTin chaperone *(CNX) & original...	0.05	OrthoFinder output from all 47 species
Tin_g08334	No alias	membrane-anchored lecTin chaperone *(CNX) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e008284_P001	CNX1, ATCNX1,...	lectin chaperone (CNX)	0.21	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
BP	GO:0006457	protein folding	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005788	endoplasmic reticulum lumen	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0006984	ER-nucleus signaling pathway	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009306	protein secretion	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009934	regulation of meristem structural organization	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0052033	obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0071692	protein localization to extracellular region	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001580	Calret/calnex	32	388

External Links

No external refs found!

AT5G07340

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation