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  5. AT5G07450

AT5G07450 (CYCP4;3)


Aliases : CYCP4;3

Description : cyclin p4;3


Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G07450
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00245040 CYCP1;1,... Cell cycle.regulation.cyclins.CYCP-type cyclin 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00124350 cycp3;1,... Cell cycle.regulation.cyclins.CYCP-type cyclin 0.03 OrthoFinder output from all 47 species
AT3G60550 CYCP3;2 cyclin p3;2 0.08 OrthoFinder output from all 47 species
AT3G63120 CYCP1;1 cyclin p1;1 0.06 OrthoFinder output from all 47 species
Adi_g006736 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Adi_g011611 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Adi_g019195 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aev_g12842 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aev_g16557 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aev_g46567 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ala_g15122 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g16985 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g17193 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g36160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04798 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Als_g13537 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Als_g21897 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Als_g37867 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aob_g07900 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aop_g05761 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g11744 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aop_g14532 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g53981 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene30001.t1 CYCP4;1, Aspi01Gene30001 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32627.t1 CYCP4;1, Aspi01Gene32627 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48169.t1 CYCP2;1, Aspi01Gene48169 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58408.t1 CYCP2;1, Aspi01Gene58408 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0056.g034223 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g07393 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Cba_g36844 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G089200.1 cycp3;1, Ceric.07G089200 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.10G034800.1 CYCP2;1, Ceric.10G034800 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Ceric.17G024900.1 CYCP4;1, Ceric.17G024900 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ceric.31G015200.1 CYCP3;2, Ceric.31G015200 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dac_g02043 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dac_g21403 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dac_g21404 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dac_g33827 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dde_g07807 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dde_g15368 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05568 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06469 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11009 CYCP4;2, CYCP4 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ehy_g19486 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011079001 CYCP1;1 Cell cycle.regulation.cyclins.CYCP-type cyclin 0.03 OrthoFinder output from all 47 species
GSVIVT01018166001 cycp3;1 Cell cycle.regulation.cyclins.CYCP-type cyclin 0.04 OrthoFinder output from all 47 species
GSVIVT01018304001 CYCP4;1 Cell cycle.regulation.cyclins.CYCP-type cyclin 0.02 OrthoFinder output from all 47 species
Gb_27032 cycp3;1 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
Gb_27223 CYCP3;2 cyclin (CYCP) 0.05 OrthoFinder output from all 47 species
Gb_39399 CYCP4;1 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46660.1 cycp3;1, LOC_Os04g46660 cyclin (CYCP) 0.08 OrthoFinder output from all 47 species
LOC_Os10g41430.1 CYCP4;1, LOC_Os10g41430 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
Len_g01797 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Lfl_g16742 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Lfl_g35971 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
MA_10289079g0010 cycp3;1 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
MA_10435168g0020 CYCP3;2 cyclin (CYCP) 0.05 OrthoFinder output from all 47 species
MA_92793g0010 cycp3;1 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
Mp3g25260.1 CYCP2;1 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
Mp7g06850.1 CYCP4;1 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
Msp_g00510 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Msp_g05627 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Nbi_g04100 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13934 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g08217 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g22726 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g28947 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Pir_g09300 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Pir_g44109 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10155 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g00643 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g07325 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g29737 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007745 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Solyc09g065200.4.1 CYCP1;1, Solyc09g065200 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
Spa_g03908 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g07670 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g07671 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Spa_g12296 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g16879 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g39740 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Tin_g27209 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g28471 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007314_P001 cycp3;1, Zm00001e007314 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Zm00001e015290_P001 CYCP4;3, Zm00001e015290 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR013922 Cyclin_PHO80-like 32 157
No external refs found!