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  5. AT5G07500

AT5G07500 (PEI1)


Aliases : PEI1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G07500

Target Alias Description ECC score Gene Family Method Actions
AT1G03790 SOM Zinc finger C-x8-C-x5-C-x3-H type family protein 0.07 OrthoFinder output from all 47 species
AT2G19810 No alias CCCH-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g049127 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Adi_g049591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054845 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Adi_g075797 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Als_g20738 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aob_g20797 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aop_g06090 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aop_g13400 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Aop_g14316 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aop_g32930 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aspi01Gene08554.t2 Aspi01Gene08554 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30050.t1 Aspi01Gene30050 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68944.t1 Aspi01Gene68944 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Aspi01Gene71552.t1 Aspi01Gene71552 regulatory factor *(TZF) of mRNA stress granule... 0.06 OrthoFinder output from all 47 species
Azfi_s0060.g034819 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037758 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Azfi_s0279.g062249 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cba_g05838 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ceric.1Z168000.1 ATTZF1, ATCTH,... regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ceric.23G017000.1 Ceric.23G017000 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ceric.24G053600.1 Ceric.24G053600 regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cre03.g146267 ATTZF1, ATCTH RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Dac_g02872 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Dac_g08831 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dac_g10045 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Dac_g15516 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Dde_g25533 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Dde_g27978 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ehy_g08338 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
GSVIVT01013901001 PEI1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.14 OrthoFinder output from all 47 species
GSVIVT01015265001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
LOC_Os01g53650.1 LOC_Os01g53650 mRNA-binding regulatory factor (TZF) 0.05 OrthoFinder output from all 47 species
LOC_Os05g10670.1 LOC_Os05g10670 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g45020.1 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.05 OrthoFinder output from all 47 species
LOC_Os07g47240.1 PEI1, LOC_Os07g47240 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33090.1 LOC_Os12g33090 mRNA-binding regulatory factor (TZF) 0.05 OrthoFinder output from all 47 species
Len_g18302 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Len_g21927 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Len_g28700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43879 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Lfl_g02270 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Lfl_g24865 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Mp6g00540.1 No alias mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Msp_g10175 No alias regulatory factor *(TZF) of mRNA stress granule... 0.05 OrthoFinder output from all 47 species
Msp_g13456 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ore_g15984 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g25247 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Ore_g29320 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ore_g35856 No alias regulatory factor *(TZF) of mRNA stress granule... 0.07 OrthoFinder output from all 47 species
Pir_g24222 SZF2, ATSZF2, ZFAR1, CZF1 regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pir_g39344 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pnu_g20981 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Pnu_g30312 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ppi_g01109 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ppi_g33576 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Ppi_g43622 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004066 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010425 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Sam_g28503 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Solyc05g041720.2.1 PEI1, Solyc05g041720 mRNA-binding regulatory factor (TZF) 0.07 OrthoFinder output from all 47 species
Solyc05g043247.1.1 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
Solyc06g082010.4.1 Solyc06g082010 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Solyc07g053750.1.1 SOM, Solyc07g053750 mRNA-binding regulatory factor (TZF) 0.08 OrthoFinder output from all 47 species
Solyc09g014640.2.1 PEI1, Solyc09g014640 mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
Solyc09g014645.1.1 PEI1, Solyc09g014645 mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
Solyc09g150108.1.1 PEI1, Solyc09g150108 mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Solyc12g008660.1.1 Solyc12g008660 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Spa_g15791 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Tin_g02786 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Tin_g04687 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Zm00001e027454_P001 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Zm00001e029465_P001 Zm00001e029465 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Zm00001e032199_P001 ATTZF1, ATCTH,... mRNA-binding regulatory factor (TZF) 0.05 OrthoFinder output from all 47 species
Zm00001e039753_P001 Zm00001e039753 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010081 regulation of inflorescence meristem growth IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP HCCA
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0010371 regulation of gibberellin biosynthetic process IEP HCCA
BP GO:0010373 negative regulation of gibberellin biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
CC GO:0016602 CCAAT-binding factor complex IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019747 regulation of isoprenoid metabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0031099 regeneration IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0045827 negative regulation of isoprenoid metabolic process IEP HCCA
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP HCCA
BP GO:0045833 negative regulation of lipid metabolic process IEP HCCA
BP GO:0045834 positive regulation of lipid metabolic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046889 positive regulation of lipid biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051055 negative regulation of lipid biosynthetic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0062013 positive regulation of small molecule metabolic process IEP HCCA
BP GO:0062014 negative regulation of small molecule metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1902930 regulation of alcohol biosynthetic process IEP HCCA
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 97 117
No external refs found!