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  5. AT5G10250

AT5G10250 (DOT3)


Aliases : DOT3

Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G10250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 RPT3, NPH3,... Root phototropism protein 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00061p00175030 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g47800... 0.05 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.06 OrthoFinder output from all 47 species
Ala_g21688 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Als_g08124 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene08949.t1 Aspi01Gene08949 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046412 No alias not classified & original description: CDS=1316-3601 0.03 OrthoFinder output from all 47 species
Cba_g03356 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ceric.32G010700.1 Ceric.32G010700 not classified & original description: pacid=50597870... 0.03 OrthoFinder output from all 47 species
GSVIVT01012508001 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01016261001 No alias BTB/POZ domain-containing protein At5g03250... 0.05 OrthoFinder output from all 47 species
Gb_34273 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os02g35970.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os12g39380.1 NPY2, LOC_Os12g39380 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g01351 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
MA_135496g0010 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_52004g0010 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Msp_g24094 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g01322 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Pir_g20228 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pp3c4_7160V3.1 Pp3c4_7160 Phototropic-responsive NPH3 family protein 0.01 OrthoFinder output from all 47 species
Pp3c4_7202V3.1 NPY2, Pp3c4_7202 Phototropic-responsive NPH3 family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013007 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Solyc03g044090.4.1 NPY2, Solyc03g044090 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc10g047530.2.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.06 OrthoFinder output from all 47 species
Spa_g16161 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g39095 MAB4, NPY1, ENP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003063_P004 NPY2, Zm00001e003063 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e008748_P001 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
Zm00001e014883_P001 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.09 OrthoFinder output from all 47 species
Zm00001e014998_P003 Zm00001e014998 BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
BP GO:0010087 phloem or xylem histogenesis IMP Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
BP GO:0010588 cotyledon vascular tissue pattern formation IMP Interproscan
BP GO:0048367 shoot system development IMP Interproscan
BP GO:0080022 primary root development IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006833 water transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 214 463
No external refs found!