AT5G12250 (TUB6)

Aliases : TUB6

Description : beta-6 tubulin

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G12250
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00251790	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
AMTR_s00009p00255970	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
AMTR_s00010p00119100	TUB6,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
AMTR_s00029p00190040	TUB8,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
AMTR_s00101p00135960	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
AT1G20010	TUB5	tubulin beta-5 chain	0.05	OrthoFinder output from all 47 species
AT1G75780	TUB1	tubulin beta-1 chain	0.05	OrthoFinder output from all 47 species
Adi_g002835	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Adi_g008453	TUB8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g015560	TUB8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g016052	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Adi_g028533	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Adi_g040881	TUB7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g048027	TUB8	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g048866	TUB2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g055550	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Adi_g068860	TUB7	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g085232	TUB7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g085233	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Adi_g094247	TUB8	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g099314	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.01	OrthoFinder output from all 47 species
Adi_g100349	TUB1	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Adi_g101044	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Adi_g103468	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Adi_g105532	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Adi_g107584	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g20343	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Aev_g20344	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Aev_g28137	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ala_g03796	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ala_g22693	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.07	OrthoFinder output from all 47 species
Als_g05405	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Als_g10334	TUB1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g10858	TUB8	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g10860	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.1	OrthoFinder output from all 47 species
Als_g18460	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.1	OrthoFinder output from all 47 species
Als_g19148	TUB7	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Als_g33099	TUB6	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Als_g54930	TUB7	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Als_g63108	TUB7	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g08895	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.08	OrthoFinder output from all 47 species
Aop_g04194	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Aop_g11143	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Aop_g20652	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Aop_g64603	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene08571.t1	TUB6, Aspi01Gene08571	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene22864.t1	TUB2, Aspi01Gene22864	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aspi01Gene35881.t1	TUB6, Aspi01Gene35881	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Azfi_s0678.g081838	TUB6	not classified & original description: CDS=1-1224	0.03	OrthoFinder output from all 47 species
Cba_g06879	TUB6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14289	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Cba_g15536	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Cba_g61850	TUB6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.03G086000.1	TUB2, Ceric.03G086000	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ceric.04G002000.1	TUB2, Ceric.04G002000	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ceric.04G088300.1	TUB8, Ceric.04G088300	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.07G056800.1	TUB6, Ceric.07G056800	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.08	OrthoFinder output from all 47 species
Ceric.07G057000.1	TUB6, Ceric.07G057000	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ceric.16G070200.1	TUB2, Ceric.16G070200	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.29G055300.1	TUB2, Ceric.29G055300	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ceric.30G059900.1	TUB6, Ceric.30G059900	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ceric.31G054800.1	TUB2, Ceric.31G054800	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ceric.37G040300.1	TUB2, Ceric.37G040300	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dac_g14313	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dac_g14314	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dac_g42639	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Dcu_g05390	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.09	OrthoFinder output from all 47 species
Dcu_g06899	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dcu_g07559	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Dcu_g08335	TUB7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13447	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dcu_g26815	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dcu_g31278	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dcu_g31279	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Dcu_g45223	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Dcu_g45419	TUB6	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g04827	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dde_g05253	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.08	OrthoFinder output from all 47 species
Dde_g22132	TUB1	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
GSVIVT01008426001	TUB8	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
GSVIVT01009913001	TUB7	Tubulin beta chain OS=Cicer arietinum	0.03	OrthoFinder output from all 47 species
GSVIVT01019758001	TUB6	Tubulin beta-4 chain OS=Eleusine indica	0.01	OrthoFinder output from all 47 species
GSVIVT01019775001	TUB8	Tubulin beta-8 chain OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01024825001	TUB8	Tubulin beta-8 chain OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01025777001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01025778001	TUB6	Tubulin beta-4 chain OS=Eleusine indica	0.05	OrthoFinder output from all 47 species
GSVIVT01028941001	TUB8	Tubulin beta-8 chain OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01037405001	TUB2	Tubulin beta-4 chain OS=Eleusine indica	0.07	OrthoFinder output from all 47 species
Gb_15590	TUB2	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.05	OrthoFinder output from all 47 species
Gb_18746	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Gb_22609	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Gb_28116	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.05	OrthoFinder output from all 47 species
Gb_29799	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.16	OrthoFinder output from all 47 species
LOC_Os01g18050.1	TUB6, LOC_Os01g18050	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
LOC_Os01g59150.1	TUB6, LOC_Os01g59150	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.15	OrthoFinder output from all 47 species
LOC_Os02g07060.1	TUB8, LOC_Os02g07060	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.06	OrthoFinder output from all 47 species
LOC_Os03g01530.1	TUB8, LOC_Os03g01530	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
LOC_Os05g34170.2	TUB6, LOC_Os05g34170	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Len_g08235	TUB6	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Len_g08236	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Len_g08315	TUB7	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Len_g12596	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Len_g18229	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Len_g29601	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Lfl_g05282	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.09	OrthoFinder output from all 47 species
Lfl_g06509	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
MA_10431251g0010	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.09	OrthoFinder output from all 47 species
MA_179650g0010	TUB8	Tubulin beta-1 chain OS=Zea mays (sp\|p18025\|tbb1_maize : 357.0)	0.01	OrthoFinder output from all 47 species
MA_230579g0020	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
MA_251404g0010	TUB2	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.08	OrthoFinder output from all 47 species
MA_4935021g0010	TUB6	Tubulin beta-1 chain OS=Zea mays (sp\|p18025\|tbb1_maize : 189.0)	0.05	OrthoFinder output from all 47 species
MA_55439g0010	TUB2	Tubulin beta-1 chain OS=Solanum tuberosum...	0.05	OrthoFinder output from all 47 species
MA_72744g0010	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
MA_7436374g0010	TUB6	Tubulin beta-6 chain OS=Zea mays (sp\|q41783\|tbb6_maize : 276.0)	0.03	OrthoFinder output from all 47 species
MA_79708g0010	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.09	OrthoFinder output from all 47 species
MA_8465279g0010	TUB6	Tubulin beta-1 chain OS=Zea mays (sp\|p18025\|tbb1_maize : 126.0)	0.08	OrthoFinder output from all 47 species
MA_9578301g0010	TUB8	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Mp1g20730.1	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Msp_g09508	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Msp_g29673	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Msp_g39204	TUB8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g45769	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Nbi_g06680	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Nbi_g06967	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Nbi_g18799	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.06	OrthoFinder output from all 47 species
Ore_g03218	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ore_g04175	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ore_g15539	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Pir_g02530	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Pir_g03054	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Pir_g12103	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Pir_g13770	TUB7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19218	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Pir_g32238	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Pnu_g06209	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.08	OrthoFinder output from all 47 species
Pnu_g23567	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Pnu_g31777	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.06	OrthoFinder output from all 47 species
Pp3c2_26580V3.1	TUB6, Pp3c2_26580	tubulin beta chain 2	0.02	OrthoFinder output from all 47 species
Ppi_g10734	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ppi_g22152	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ppi_g27529	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ppi_g35826	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.07	OrthoFinder output from all 47 species
Ppi_g41849	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ppi_g61758	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.06	OrthoFinder output from all 47 species
Ppi_g62362	TUB8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63060	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000584	TUB2	not classified & original description: CDS=76-996	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020711	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789	TUB6	not classified & original description: CDS=157-1053	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026924	TUB1	not classified & original description: CDS=124-1059	0.04	OrthoFinder output from all 47 species
Sam_g08880	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g16934	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo138663	TUB6	Tubulin beta-1/beta-2 chain OS=Chlamydomonas reinhardtii	0.02	OrthoFinder output from all 47 species
Smo164404	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.08	OrthoFinder output from all 47 species
Smo170592	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.09	OrthoFinder output from all 47 species
Smo183654	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Smo186992	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Smo230116	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo23468	TUB8	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Smo266715	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo408201	TUB8	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Solyc03g025730.3.1	TUB8, Solyc03g025730	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Solyc03g118760.4.1	TUB6, Solyc03g118760	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Solyc04g150156.1.1	TUB6, Solyc04g150156	Tubulin beta-1 chain OS=Zea mays (sp\|p18025\|tbb1_maize : 126.0)	0.02	OrthoFinder output from all 47 species
Solyc06g035970.3.1	TUB8, Solyc06g035970	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.06	OrthoFinder output from all 47 species
Solyc10g080940.3.1	TUB6, Solyc10g080940	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.09	OrthoFinder output from all 47 species
Solyc10g085020.3.1	TUB8, Solyc10g085020	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Solyc10g086760.2.1	TUB8, Solyc10g086760	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Spa_g09907	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Spa_g13732	TUB7	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g24819	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Spa_g40586	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.12	OrthoFinder output from all 47 species
Spa_g40800	TUB8	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Spa_g48008	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54478	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Spa_g54479	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.09	OrthoFinder output from all 47 species
Spa_g54481	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Spa_g54936	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Tin_g05083	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Tin_g06951	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Tin_g09112	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Tin_g19305	TUB7	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Tin_g32510	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Zm00001e000048_P003	TUB2, Zm00001e000048	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Zm00001e017421_P002	TUB6, Zm00001e017421	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.06	OrthoFinder output from all 47 species
Zm00001e037773_P002	TUB2, Zm00001e037773	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
BP	GO:0000271	polysaccharide biosynthetic process	RCA	Interproscan
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005200	structural constituent of cytoskeleton	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005856	cytoskeleton	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006006	glucose metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006084	acetyl-CoA metabolic process	RCA	Interproscan
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006094	gluconeogenesis	RCA	Interproscan
BP	GO:0006096	glycolytic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006165	nucleoside diphosphate phosphorylation	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006637	acyl-CoA metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006757	ATP generation from ADP	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006833	water transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	RCA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	RCA	Interproscan
BP	GO:0007017	microtubule-based process	ISS	Interproscan
BP	GO:0007030	Golgi organization	RCA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009135	purine nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009185	ribonucleoside diphosphate metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	RCA	Interproscan
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009651	response to salt stress	RCA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009740	gibberellic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009825	multidimensional cell growth	RCA	Interproscan
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009932	cell tip growth	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010162	seed dormancy process	RCA	Interproscan
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	RCA	Interproscan
CC	GO:0015630	microtubule cytoskeleton	ISS	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0019318	hexose metabolic process	None	Extended
BP	GO:0019319	hexose biosynthetic process	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035383	thioester metabolic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042044	fluid transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043473	pigmentation	None	Extended
BP	GO:0043476	pigment accumulation	None	Extended
BP	GO:0043478	pigment accumulation in response to UV light	None	Extended
BP	GO:0043479	pigment accumulation in tissues in response to UV light	None	Extended
BP	GO:0043480	pigment accumulation in tissues	None	Extended
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	RCA	Interproscan
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046031	ADP metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046364	monosaccharide biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	RCA	Interproscan
BP	GO:0046939	nucleotide phosphorylation	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004568	chitinase activity	IEP	HCCA
CC	GO:0005769	early endosome	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
MF	GO:0008810	cellulase activity	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
CC	GO:0009504	cell plate	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009914	hormone transport	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
BP	GO:0010015	root morphogenesis	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0030154	cell differentiation	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0031122	cytoplasmic microtubule organization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032880	regulation of protein localization	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0042732	D-xylose metabolic process	IEP	HCCA
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0043622	cortical microtubule organization	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0048040	UDP-glucuronate decarboxylase activity	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0050826	response to freezing	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0060341	regulation of cellular localization	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	3	211
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382

External Links

No external refs found!

AT5G12250 (TUB6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation