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  5. AT5G13580

AT5G13580


Description : ABC-2 type transporter family protein


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G13580
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G53270 No alias ABC-2 type transporter family protein 0.06 OrthoFinder output from all 47 species
AT2G37360 No alias ABC-2 type transporter family protein 0.07 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.08 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.06 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025582001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.1 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
LOC_Os05g31910.2 LOC_Os05g31910 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_10432886g0010 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Nbi_g11905 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016241 No alias subfamily ABCG transporter & original description: CDS=1-2160 0.04 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Solyc04g010210.1.1 Solyc04g010210 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e020032_P001 Zm00001e020032 lipid transporter (STR) 0.03 OrthoFinder output from all 47 species
Zm00001e029545_P001 Zm00001e029545 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009624 response to nematode IEP Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008515 sucrose transmembrane transporter activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009820 alkaloid metabolic process IEP HCCA
BP GO:0009821 alkaloid biosynthetic process IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015154 disaccharide transmembrane transporter activity IEP HCCA
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP HCCA
BP GO:0015766 disaccharide transport IEP HCCA
BP GO:0015770 sucrose transport IEP HCCA
BP GO:0015772 oligosaccharide transport IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 109 261
IPR013525 ABC_2_trans 423 631
No external refs found!