AT5G14870 (CNGC18, ATCNGC18)

Aliases : CNGC18, ATCNGC18

Description : cyclic nucleotide-gated channel 18

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G14870

Target	Alias	Description	ECC score	Gene Family Method
Aev_g14826	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Als_g12676	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Als_g34084	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene46957.t1	CNGC15,...	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Azfi_s0048.g030570	ATCNGC9, CNGC9	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Azfi_s0164.g054260	ATCNGC9, CNGC9	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Azfi_s0301.g063721	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Cba_g13367	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Ceric.14G091000.1	CNGC7, ATCNGC7,...	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ceric.37G059700.1	CNGC15,...	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001264.1	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dac_g09606	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Dac_g14388	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ehy_g19188	ATCNGC9, CNGC9	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
LOC_Os01g57370.1	DND2, CNGC4,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
LOC_Os02g54760.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.05	OrthoFinder output from all 47 species
LOC_Os09g38580.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
LOC_Os12g06570.1	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.1	OrthoFinder output from all 47 species
LOC_Os12g28260.1	CNGC7, ATCNGC7,...	cyclic nucleotide-gated cation channel (CNGC)	0.07	OrthoFinder output from all 47 species
Len_g21733	CNGC5, ATCNGC5	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Msp_g26614	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g32178	CNGC5, ATCNGC5	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ore_g09435	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ore_g20891	DND1, ATCNGC2, CNGC2	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Pnu_g18538	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Pnu_g18670	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ppi_g06447	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025297	DND1, ATCNGC2, CNGC2	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Sam_g11868	No alias	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Solyc02g086990.4.1	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.08	OrthoFinder output from all 47 species
Solyc03g007250.1.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Solyc03g007260.3.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Solyc03g116850.3.1	ATCNGC8, CNGC8,...	cyclic nucleotide-gated cation channel (CNGC)	0.04	OrthoFinder output from all 47 species
Solyc06g051920.4.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.07	OrthoFinder output from all 47 species
Solyc07g005590.3.1	CNGC5, ATCNGC5,...	cyclic nucleotide-gated cation channel (CNGC)	0.04	OrthoFinder output from all 47 species
Solyc07g006510.3.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Solyc12g010010.2.1	CNGC5, ATCNGC5,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Zm00001e006772_P003	CNGC5, ATCNGC5,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Zm00001e011591_P002	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.04	OrthoFinder output from all 47 species
Zm00001e017971_P001	CNGC7, ATCNGC7,...	cyclic nucleotide-gated cation channel (CNGC)	0.05	OrthoFinder output from all 47 species
Zm00001e030701_P001	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0006874	cellular calcium ion homeostasis	IDA	Interproscan
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	IMP	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
CC	GO:0016324	apical plasma membrane	IDA	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	None	Extended
MF	GO:0030551	cyclic nucleotide binding	ISS	Interproscan
BP	GO:0032502	developmental process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048868	pollen tube development	RCA	Interproscan
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055074	calcium ion homeostasis	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	HCCA
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
MF	GO:0005451	obsolete monoatomic cation:proton antiporter activity	IEP	HCCA
MF	GO:0005484	SNAP receptor activity	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0006885	regulation of pH	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015385	sodium:proton antiporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0051139	metal cation:proton antiporter activity	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0080092	regulation of pollen tube growth	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	472	559
IPR005821	Ion_trans_dom	49	377

External Links

No external refs found!

AT5G14870 (CNGC18, ATCNGC18)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation