Description : Ribosomal protein L27 family protein
Gene families : OG0002147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G15220 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G40950 | RPL27 | ribosomal protein large subunit 27 | 0.02 | OrthoFinder output from all 47 species | |
| Als_g25736 | RPL27 | component *(bL27c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033086001 | RPL27 | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g13361 | No alias | component *(bL27m) of large mitoribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Smo159042 | RPL27 | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g30810 | No alias | component *(bL27m) of large mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | ISS | Interproscan |
| CC | GO:0005840 | ribosome | ISS | Interproscan |
| BP | GO:0006412 | translation | ISS | Interproscan |
| CC | GO:0009507 | chloroplast | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009853 | photorespiration | IEP | HCCA |
| BP | GO:0010038 | response to metal ion | IEP | HCCA |
| CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
| BP | GO:0019932 | second-messenger-mediated signaling | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0035966 | response to topologically incorrect protein | IEP | HCCA |
| BP | GO:0043094 | cellular metabolic compound salvage | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
| BP | GO:0046686 | response to cadmium ion | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051788 | response to misfolded protein | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0080129 | proteasome core complex assembly | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001684 | Ribosomal_L27 | 47 | 127 |
| No external refs found! |
