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  5. AT5G16050

AT5G16050 (GF14 UPSILON, GRF5)


Aliases : GF14 UPSILON, GRF5

Description : general regulatory factor 5


Gene families : OG0000206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16050

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00055100 GF14 NU, GRF7,... 14-3-3-like protein OS=Lilium longiflorum 0.03 OrthoFinder output from all 47 species
Adi_g010056 RCI1, GRF3 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Adi_g104325 RCI1, GRF3 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Ala_g01189 GF14 NU, GRF7 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Ala_g14155 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Als_g12003 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Aob_g28707 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Aop_g01071 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Aop_g01659 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Aop_g41605 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Cba_g24320 GF14 NU, GRF7 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Cba_g26160 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G075500.1 GRF12, GF14... 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021352.44 GRF10, GF14... 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.52 GRF10, GF14... 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g18130 GF14 NU, GRF7 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08069 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g48515 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.05 OrthoFinder output from all 47 species
Dde_g04662 RCI1, GRF3 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Dde_g12231 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Len_g29635 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
MA_12670g0020 GRF12, GF14 IOTA 14-3-3-like protein B OS=Vicia faba... 0.05 OrthoFinder output from all 47 species
Msp_g00367 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g06608 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g23728 RCI1, GRF3 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g27412 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g53704 GF14 NU, GRF7 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Sam_g26304 No alias 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g063070.3.1 RCI1, GRF3,... 14-3-3 protein 4 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Spa_g24341 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Spa_g24757 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Spa_g51646 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.02 OrthoFinder output from all 47 species
Tin_g04959 GRF12, GF14 IOTA 14-3-3 phosphoprotein-binding protein *(GRF) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e004159_P001 GF14 NU, GRF7,... 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Zm00001e022435_P001 GF14 NU, GRF7,... 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Zm00001e041020_P001 GF14 NU, GRF7,... 14-3-3-like protein GF14-12 OS=Zea mays... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IDA Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005635 nuclear envelope IDA Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
MF GO:0045309 protein phosphorylated amino acid binding TAS Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
MF GO:0008381 mechanosensitive monoatomic ion channel activity IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP HCCA
MF GO:0010428 methyl-CpNpG binding IEP HCCA
MF GO:0010429 methyl-CpNpN binding IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031445 regulation of heterochromatin formation IEP HCCA
BP GO:0031453 positive regulation of heterochromatin formation IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0031508 pericentric heterochromatin formation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044089 positive regulation of cellular component biogenesis IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050982 detection of mechanical stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090308 regulation of DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0090309 positive regulation of DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0120261 regulation of heterochromatin organization IEP HCCA
BP GO:0120263 positive regulation of heterochromatin organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:0140719 constitutive heterochromatin formation IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1902275 regulation of chromatin organization IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1905269 positive regulation of chromatin organization IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR023410 14-3-3_domain 13 237
No external refs found!