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  5. AT5G16880

AT5G16880


Description : Target of Myb protein 1


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G16880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00118270 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Adi_g080534 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17486 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01820 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12622 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0045.g030003 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g12993 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58158 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05715 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17236 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014122001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01030233001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Gb_13955 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os02g46962.1 LOC_Os02g46962 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
LOC_Os06g22650.1 LOC_Os06g22650 TOM endomembrane trafficking associated protein 0.07 OrthoFinder output from all 47 species
LOC_Os11g09329.1 LOC_Os11g09329 TOM endomembrane trafficking associated protein 0.05 OrthoFinder output from all 47 species
Len_g05274 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10303853g0010 No alias TOM1-like protein 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10433759g0010 No alias TOM1-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g06204 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45551 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06559 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01962 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07313 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29590 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Smo176673 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder output from all 47 species
Solyc03g097070.3.1 Solyc03g097070 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc08g068370.3.1 Solyc08g068370 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
Spa_g06704 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11081 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005795 Golgi stack ISS Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
BP GO:0006886 intracellular protein transport ISS Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport ISS Interproscan
MF GO:0008565 obsolete protein transporter activity ISS Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003878 ATP citrate synthase activity IEP HCCA
MF GO:0004557 alpha-galactosidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006085 acetyl-CoA biosynthetic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006677 glycosylceramide metabolic process IEP HCCA
BP GO:0006687 glycosphingolipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0009346 ATP-independent citrate lyase complex IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009720 detection of hormone stimulus IEP HCCA
BP GO:0009726 detection of endogenous stimulus IEP HCCA
BP GO:0009727 detection of ethylene stimulus IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016004 phospholipase activator activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016137 glycoside metabolic process IEP HCCA
BP GO:0016139 glycoside catabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019377 glycolipid catabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030149 sphingolipid catabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0032870 cellular response to hormone stimulus IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
BP GO:0046477 glycosylceramide catabolic process IEP HCCA
BP GO:0046479 glycosphingolipid catabolic process IEP HCCA
BP GO:0046514 ceramide catabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0060229 lipase activator activity IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071369 cellular response to ethylene stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071495 cellular response to endogenous stimulus IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 47 179
IPR004152 GAT_dom 241 313
No external refs found!