AT5G17470

Description : EF hand calcium-binding protein family

Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G17470
Cluster	HCCA: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
AT2G36180	No alias	EF hand calcium-binding protein family	0.03	OrthoFinder output from all 47 species
AT3G03400	No alias	EF hand calcium-binding protein family	0.03	OrthoFinder output from all 47 species
LOC_Os08g44660.1	APC1, PC1, LOC_Os08g44660	Polcalcin Phl p 7 OS=Phleum pratense...	0.02	OrthoFinder output from all 47 species
Sam_g08724	No alias	calcium sensor *(CML) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005802	trans-Golgi network	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	4	29
IPR002048	EF_hand_dom	38	64
IPR002048	EF_hand_dom	77	139

External Links

No external refs found!