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  5. AT5G17680

AT5G17680


Description : disease resistance protein (TIR-NBS-LRR class), putative


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273020 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00250780 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00233110 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
AMTR_s00047p00138210 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00219240 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00085p00122470 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 OrthoFinder output from all 47 species
AT1G57650 No alias ATP binding 0.03 OrthoFinder output from all 47 species
AT1G63870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G66090 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
AT3G25505 No alias No description available 0.04 OrthoFinder output from all 47 species
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G09360 No alias NB-ARC domain-containing disease resistance protein 0.03 OrthoFinder output from all 47 species
AT4G16857 No alias No description available 0.04 OrthoFinder output from all 47 species
AT4G16860 RPP4 Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.03 OrthoFinder output from all 47 species
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G16940 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G36930 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.04 OrthoFinder output from all 47 species
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT5G40100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Ala_g11037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11473 WRKY16, ATWRKY16, TTR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020962001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.01 OrthoFinder output from all 47 species
GSVIVT01020964001 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.01 OrthoFinder output from all 47 species
GSVIVT01025918001 No alias External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
Gb_16090 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_31442 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10430493g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_662972g0010 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Pir_g25659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30870 MEKK4, ATWRKY19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46310 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 203 412
IPR000157 TIR_dom 19 178
IPR011713 Leu-rich_rpt_3 603 622
No external refs found!