Description : RING/U-box superfamily protein
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G18760 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00170p00024360 | evm_27.TU.AmTr_v1... | No description available | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g15074 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69359.t1 | Aspi01Gene69359 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0096.g043766 | No alias | not classified & original description: CDS=488-1357 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0293.g063480 | No alias | E3 ubiquitin ligase & original description: CDS=497-1888 | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g10273 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08952 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26464 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17149 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08769 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014864_P002 | Zm00001e014864 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0008150 | biological_process | ND | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| CC | GO:0009507 | chloroplast | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003951 | NAD+ kinase activity | IEP | HCCA |
| MF | GO:0004565 | beta-galactosidase activity | IEP | HCCA |
| MF | GO:0004620 | phospholipase activity | IEP | HCCA |
| MF | GO:0004629 | phospholipase C activity | IEP | HCCA |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | HCCA |
| MF | GO:0005402 | carbohydrate:monoatomic cation symporter activity | IEP | HCCA |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009269 | response to desiccation | IEP | HCCA |
| BP | GO:0010191 | mucilage metabolic process | IEP | HCCA |
| BP | GO:0010192 | mucilage biosynthetic process | IEP | HCCA |
| CC | GO:0010287 | plastoglobule | IEP | HCCA |
| MF | GO:0015925 | galactosidase activity | IEP | HCCA |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0030029 | actin filament-based process | IEP | HCCA |
| BP | GO:0030048 | actin filament-based movement | IEP | HCCA |
| BP | GO:0048354 | mucilage biosynthetic process involved in seed coat development | IEP | HCCA |
| BP | GO:0048359 | mucilage metabolic process involved in seed coat development | IEP | HCCA |
| BP | GO:0048513 | animal organ development | IEP | HCCA |
| BP | GO:0051645 | Golgi localization | IEP | HCCA |
| BP | GO:0051646 | mitochondrion localization | IEP | HCCA |
| BP | GO:0060151 | peroxisome localization | IEP | HCCA |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 203 | 249 |
| No external refs found! |
