AT5G19820 (emb2734)

Aliases : emb2734

Description : ARM repeat superfamily protein

Gene families : OG0001766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001766_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G19820
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
Aev_g11168	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.04	OrthoFinder output from all 47 species
Als_g02620	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
Als_g19131	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.03	OrthoFinder output from all 47 species
Ceric.17G003600.1	emb2734, Ceric.17G003600	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
Ceric.26G014000.1	emb2734, Ceric.26G014000	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001030.12	No alias	No description available	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001030.13	emb2734	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Cre14.g633750	emb2734	Protein translocation.nucleus.nucleocytoplasmic...	0.04	OrthoFinder output from all 47 species
Dcu_g04981	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g12588	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.06	OrthoFinder output from all 47 species
GSVIVT01025460001	emb2734	Protein translocation.nucleus.nucleocytoplasmic...	0.05	OrthoFinder output from all 47 species
GSVIVT01033417001	emb2734	Protein translocation.nucleus.nucleocytoplasmic...	0.07	OrthoFinder output from all 47 species
LOC_Os03g49420.1	emb2734, LOC_Os03g49420	IMB3 nucleocytoplasmic import karyopherin	0.06	OrthoFinder output from all 47 species
Len_g03406	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
Len_g16328	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g06735	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g10978	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
MA_10348865g0010	emb2734	IMB3 nucleocytoplasmic import karyopherin	0.05	OrthoFinder output from all 47 species
MA_10432206g0010	emb2734	IMB3 nucleocytoplasmic import karyopherin	0.04	OrthoFinder output from all 47 species
MA_10432351g0030	emb2734	IMB3 nucleocytoplasmic import karyopherin	0.09	OrthoFinder output from all 47 species
MA_18699g0020	emb2734	IMB3 nucleocytoplasmic import karyopherin	0.05	OrthoFinder output from all 47 species
Mp3g07820.1	emb2734	IMB3 nucleocytoplasmic import karyopherin	0.09	OrthoFinder output from all 47 species
Nbi_g03212	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.11	OrthoFinder output from all 47 species
Nbi_g09038	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
Pp3c7_4470V3.1	emb2734, Pp3c7_4470	ARM repeat superfamily protein	0.01	OrthoFinder output from all 47 species
Ppi_g18585	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.03	OrthoFinder output from all 47 species
Smo140234	emb2734	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Spa_g12761	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.05	OrthoFinder output from all 47 species
Tin_g21538	emb2734	nucleocytoplasmic import karyopherin *(IMB3) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e005369_P004	emb2734, Zm00001e005369	IMB3 nucleocytoplasmic import karyopherin	0.09	OrthoFinder output from all 47 species
Zm00001e035335_P001	emb2734, Zm00001e035335	IMB3 nucleocytoplasmic import karyopherin	0.12	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	RCA	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
MF	GO:0016829	lyase activity	ISS	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030076	light-harvesting complex	None	Extended
CC	GO:0030089	phycobilisome	ISS	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034406	cell wall beta-glucan metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0052541	plant-type cell wall cellulose metabolic process	RCA	Interproscan
BP	GO:0052546	cell wall pectin metabolic process	RCA	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006606	protein import into nucleus	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034504	protein localization to nucleus	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
BP	GO:0051211	anisotropic cell growth	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000357	HEAT	926	953

External Links

No external refs found!

AT5G19820 (emb2734)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation