1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G20470

AT5G20470


Description : myosin, putative


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00059560 ATXIK, XI-17,... Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
Adi_g051494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12535 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Als_g13947 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Aob_g19963 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Cba_g21956 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000056.26 ATXIG, XIG Myosin-13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.17 XI-16, MYA3,... Myosin-12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000367.45 XI-6, ATMYA2, XI-2, MYA2 Myosin-6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.58 XI-8, XI-B, XIB, ATXIB Myosin-8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.59 XIF, ATMYO5, ATXIF Myosin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01005233001 XIA, ATXIA Myosin-6 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01028990001 XI-8, XI-B, XIB, ATXIB Cytoskeleton.microfilament network.myosin... 0.04 OrthoFinder output from all 47 species
LOC_Os03g64290.1 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Len_g08332 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
MA_10433033g0020 XIF, ATMYO5, ATXIF Myosin-12 OS=Arabidopsis thaliana (sp|f4iru3|myo12_arath : 701.0) 0.01 OrthoFinder output from all 47 species
MA_502345g0010 ATVIIIA, VIIIA Myosin-3 OS=Arabidopsis thaliana (sp|f4i507|myo3_arath : 283.0) 0.02 OrthoFinder output from all 47 species
MA_9337238g0010 XI-15, ATXI-I, XI-I Myosin-17 OS=Arabidopsis thaliana (sp|f4k5j1|myo17_arath : 128.0) 0.02 OrthoFinder output from all 47 species
Nbi_g01490 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16120 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Pnu_g13852 XIF, ATMYO5, ATXIF not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016948 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Sam_g11849 No alias class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Smo98074 ATVIIIA, VIIIA Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
Solyc06g083960.3.1 XIC, ATXIC,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Solyc08g061520.3.1 XI-15, ATXI-I,... Myosin-15 OS=Arabidopsis thaliana (sp|q0wpu1|myo15_arath : 724.0) 0.02 OrthoFinder output from all 47 species
Solyc11g006220.2.1 ATXIE, XIE,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e012846_P002 XI-15, ATXI-I,... Myosin-15 OS=Arabidopsis thaliana (sp|q0wpu1|myo15_arath : 696.0) 0.03 OrthoFinder output from all 47 species
Zm00001e016227_P002 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002710 Dilute_dom 399 474
No external refs found!