AT5G21010 (BPM5, ATBPM5)

Aliases : BPM5, ATBPM5

Description : BTB-POZ and MATH domain 5

Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G21010

Target	Alias	Description	ECC score	Gene Family Method
Ala_g25947	ATBPM2, BPM2	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
MA_10428663g0010	ATBPM2, BPM2	BTB/POZ and MATH domain-containing protein 1...	0.03	OrthoFinder output from all 47 species
Nbi_g31771	ATBPM2, BPM2	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016631	ATBPM2, BPM2	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sam_g17029	No alias	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.04	OrthoFinder output from all 47 species
Sam_g25955	No alias	substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Solyc01g080250.3.1	ATBPM2, BPM2,...	BTB/POZ and MATH domain-containing protein 2...	0.03	OrthoFinder output from all 47 species
Zm00001e005948_P002	BPM4, ATBPM4,...	BTB/POZ and MATH domain-containing protein 4...	0.03	OrthoFinder output from all 47 species
Zm00001e011888_P002	BPM4, ATBPM4,...	BTB/POZ and MATH domain-containing protein 4...	0.03	OrthoFinder output from all 47 species
Zm00001e030368_P005	ATBPM2, BPM2,...	BTB/POZ and MATH domain-containing protein 1...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	IEP	Interproscan
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009414	response to water deprivation	None	Extended
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042631	cellular response to water deprivation	IEP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071229	cellular response to acid chemical	None	Extended
BP	GO:0071462	cellular response to water stimulus	None	Extended
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEP	Interproscan
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000793	condensed chromosome	IEP	HCCA
BP	GO:0001709	cell fate determination	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006282	regulation of DNA repair	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
MF	GO:0008327	methyl-CpG binding	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
CC	GO:0015030	Cajal body	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015804	neutral amino acid transport	IEP	HCCA
BP	GO:0015824	proline transport	IEP	HCCA
CC	GO:0016604	nuclear body	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031507	heterochromatin formation	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0045739	positive regulation of DNA repair	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	HCCA
BP	GO:2001022	positive regulation of response to DNA damage stimulus	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000210	BTB/POZ_dom	191	310

External Links

No external refs found!

AT5G21010 (BPM5, ATBPM5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation