AT5G22400

Description : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain

Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G22400

Target	Alias	Description	ECC score	Gene Family Method
AT2G46710	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.03	OrthoFinder output from all 47 species
Adi_g082371	No alias	ROP-activating protein *(RopGAP) & original description: none	0.03	OrthoFinder output from all 47 species
Gb_17730	No alias	ROP-activating protein (RopGAP)	0.03	OrthoFinder output from all 47 species
LOC_Os02g45600.1	LOC_Os02g45600	ROP-activating protein (RopGAP)	0.04	OrthoFinder output from all 47 species
Nbi_g01149	No alias	ROP-activating protein *(RopGAP) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
CC	GO:0010008	endosome membrane	IEP	HCCA
CC	GO:0012506	vesicle membrane	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	HCCA
CC	GO:0030904	retromer complex	IEP	HCCA
CC	GO:0031902	late endosome membrane	IEP	HCCA
CC	GO:0032585	multivesicular body membrane	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0045324	late endosome to vacuole transport	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0090351	seedling development	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000095	CRIB_dom	116	143
IPR000198	RhoGAP_dom	179	315

External Links

No external refs found!