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  5. AT5G22540

AT5G22540


Description : Plant protein of unknown function (DUF247)


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22540
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00072590 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00254540 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00023p00168910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00170960 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00171000 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G65985 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G44710 No alias Plant protein of unknown function (DUF247) 0.05 OrthoFinder output from all 47 species
AT3G47250 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.06 OrthoFinder output from all 47 species
AT3G50150 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT3G50200 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.07 OrthoFinder output from all 47 species
AT5G22550 No alias Plant protein of unknown function (DUF247) 0.06 OrthoFinder output from all 47 species
Aev_g16580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08493.t1 Aspi01Gene08493 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19103.t1 Aspi01Gene19103 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22022.t1 Aspi01Gene22022 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22026.t1 Aspi01Gene22026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48412.t1 Aspi01Gene48412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57926.t1 Aspi01Gene57926 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72945.t1 Aspi01Gene72945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G018800.1 Ceric.06G018800 not classified & original description: pacid=50620702... 0.03 OrthoFinder output from all 47 species
Ceric.08G043100.1 Ceric.08G043100 not classified & original description: pacid=50638846... 0.03 OrthoFinder output from all 47 species
Dac_g00185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g27578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48193 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g52253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033794001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033984001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03494 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12420 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_15961 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_20970 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_28782 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_37284 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_37289 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g15230.1 LOC_Os05g15230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g42570.1 LOC_Os08g42570 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g33970.1 LOC_Os11g33970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g35601 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434321g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_155516g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_413488g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_6958038g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_92471g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g02930.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g16570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g50677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0185.g024999 No alias not classified & original description: CDS=1-447 0.02 OrthoFinder output from all 47 species
Solyc01g057260.4.1 Solyc01g057260 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g093020.3.1 Solyc02g093020 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc10g079520.1.1 Solyc10g079520 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g04556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023471_P002 Zm00001e023471 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e041187_P001 Zm00001e041187 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009414 response to water deprivation RCA Interproscan
BP GO:0009693 ethylene biosynthetic process RCA Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0042538 hyperosmotic salinity response RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 33 420
No external refs found!